Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.16□□□□□ -0.14
COL6A2P12110 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
COL6A2P12110 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.16□□□□□ -0.14
COL6A2P12110 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.16□□□□□ -0.14
COL6A2P12110 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL6A2P12110 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC244394.1-201ENST00000435000 1665 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 MKRN5P-201ENST00000445263 1467 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 HOMER2P2-201ENST00000451621 847 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.15□□□□□ -0.14
COL6A2P12110 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC009955.4-201ENST00000597192 544 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC009884.2-201ENST00000603110 324 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 RHOXF1P1-202ENST00000635473 501 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.15□□□□□ -0.14
COL6A2P12110 CES1P1-201ENST00000421606 1704 ntBASIC14.15□□□□□ -0.14
COL6A2P12110 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.15□□□□□ -0.14
COL6A2P12110 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COL6A2P12110 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL6A2P12110 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.15□□□□□ -0.14
COL6A2P12110 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COL6A2P12110 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COL6A2P12110 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COL6A2P12110 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
COL6A2P12110 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COL6A2P12110 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
COL6A2P12110 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COL6A2P12110 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
COL6A2P12110 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL6A2P12110 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COL6A2P12110 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms