Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 PEG13-201ENST00000631594 5667 ntBASIC12.03□□□□□ -0.48
CD74P04233 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
CD74P04233 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CD74P04233 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 AC093433.1-201ENST00000458048 571 ntBASIC12.03□□□□□ -0.48
CD74P04233 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 AC067863.1-201ENST00000494933 530 ntBASIC12.03□□□□□ -0.48
CD74P04233 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 AC010327.4-202ENST00000591484 748 ntBASIC12.03□□□□□ -0.48
CD74P04233 ENPP7P14-201ENST00000621765 1040 ntBASIC12.03□□□□□ -0.48
CD74P04233 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.03□□□□□ -0.48
CD74P04233 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CD74P04233 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD74P04233 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.03□□□□□ -0.48
CD74P04233 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
CD74P04233 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
CD74P04233 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CD74P04233 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD74P04233 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 AC092183.1-201ENST00000469884 875 ntBASIC12.02□□□□□ -0.49
CD74P04233 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 AC022137.2-201ENST00000503482 481 ntBASIC12.02□□□□□ -0.49
CD74P04233 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 AC025678.2-201ENST00000562061 970 ntBASIC12.02□□□□□ -0.49
CD74P04233 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.02□□□□□ -0.49
CD74P04233 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms