Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC8.49□□□□□ -1.05
APOBP04114 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC8.49□□□□□ -1.05
APOBP04114 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 AC097359.2-201ENST00000604992 2389 ntBASIC8.49□□□□□ -1.05
APOBP04114 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC8.49□□□□□ -1.05
APOBP04114 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 FES-204ENST00000414248 2327 ntTSL 2 BASIC8.49□□□□□ -1.05
APOBP04114 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
APOBP04114 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 IGHVII-74-1-201ENST00000517572 241 ntBASIC8.49□□□□□ -1.05
APOBP04114 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC8.49□□□□□ -1.05
APOBP04114 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 AC148476.1-201ENST00000622182 705 ntBASIC8.49□□□□□ -1.05
APOBP04114 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC8.49□□□□□ -1.05
APOBP04114 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 AC022532.1-201ENST00000624563 1728 ntBASIC8.49□□□□□ -1.05
APOBP04114 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
APOBP04114 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
APOBP04114 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 SERPINB8P1-201ENST00000401898 377 ntBASIC8.49□□□□□ -1.05
APOBP04114 PGAM1P10-201ENST00000402426 761 ntBASIC8.49□□□□□ -1.05
APOBP04114 AC015818.1-201ENST00000451011 244 ntBASIC8.49□□□□□ -1.05
APOBP04114 AC009517.1-201ENST00000454750 570 ntBASIC8.49□□□□□ -1.05
APOBP04114 AC022447.6-201ENST00000515522 438 ntBASIC8.49□□□□□ -1.05
APOBP04114 RN7SL322P-201ENST00000583519 299 ntBASIC8.49□□□□□ -1.05
APOBP04114 TLE2-205ENST00000586422 389 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
APOBP04114 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC8.49□□□□□ -1.05
APOBP04114 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
APOBP04114 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 NUP210P2-201ENST00000510577 282 ntBASIC8.48□□□□□ -1.05
APOBP04114 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 NAA38-204ENST00000575208 529 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 AC136475.9-201ENST00000605240 497 ntBASIC8.48□□□□□ -1.05
APOBP04114 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 GSTM2P1-201ENST00000405166 654 ntBASIC8.48□□□□□ -1.05
APOBP04114 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC8.48□□□□□ -1.05
APOBP04114 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 RN7SL460P-201ENST00000582806 258 ntBASIC8.48□□□□□ -1.05
APOBP04114 AC006273.1-201ENST00000606966 861 ntBASIC8.48□□□□□ -1.05
APOBP04114 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC8.48□□□□□ -1.05
APOBP04114 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
APOBP04114 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC8.48□□□□□ -1.05
APOBP04114 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
APOBP04114 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms