Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 KRT8P25-201ENST00000473150 1456 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 SERPINA7P1-201ENST00000443077 631 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 RPL10P8-201ENST00000522888 313 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 ALG10-202ENST00000538927 571 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 FAM223B-202ENST00000598177 713 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 FAM223A-202ENST00000625204 713 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 DUX4L33-201ENST00000635217 958 ntBASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM88BA6NKF7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AL365203.3-201ENST00000609742 2057 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC068587.6-202ENST00000641839 5619 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 SDCBP2P1-201ENST00000416115 614 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 PLAC9P1-203ENST00000440031 223 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 RN7SL452P-201ENST00000482923 291 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 RPL30-213ENST00000523172 274 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC010335.3-201ENST00000623767 531 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC091905.3-201ENST00000624959 234 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 CDIPT-AS1-203ENST00000638164 713 ntBASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM88BA6NKF7 ACE3P-201ENST00000423435 1973 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms