Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 RN7SKP109-201ENST00000410592 316 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC004837.1-201ENST00000446267 564 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 LYPLA2P1-203ENST00000447689 696 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 CTBP2P4-201ENST00000513884 920 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC009145.4-201ENST00000625119 1294 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC090502.4-201ENST00000551714 1386 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 RN7SL832P-201ENST00000607781 1756 ntBASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRIT1Q9P2V4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRIT1Q9P2V4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 PYY2-201ENST00000315776 282 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 DPY19L2P5-201ENST00000456300 331 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SCARNA12-201ENST00000459155 270 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AP001267.2-201ENST00000532619 2086 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AL512310.5-201ENST00000551999 515 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AC007250.1-201ENST00000608934 338 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AL132780.4-201ENST00000624870 1135 ntBASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRIT1Q9P2V4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRIT1Q9P2V4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms