Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 MIR4472-1-201ENST00000584349 80 ntBASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 AC104506.1-201ENST00000609247 429 ntBASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 MIR6074-201ENST00000612054 107 ntBASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 FO393412.1-201ENST00000619841 382 ntBASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 AL591122.2-201ENST00000624125 1853 ntBASIC16.18■□□□□ 0.18
SYNGAP1Q96PV0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 PSMD4P1-201ENST00000433951 1109 ntBASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 TPT1P11-201ENST00000458482 498 ntBASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 SCARNA12-201ENST00000459155 270 ntBASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AC010234.1-201ENST00000494599 870 ntBASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 AC002044.2-201ENST00000624910 970 ntBASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SYNGAP1Q96PV0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AC097376.2-205ENST00000610159 5334 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AC064801.2-201ENST00000625052 1303 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AC113367.3-201ENST00000508316 1912 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AC006987.1-201ENST00000413610 527 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 GCSHP3-201ENST00000431120 391 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 RN7SL767P-201ENST00000493013 295 ntBASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNGAP1Q96PV0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms