Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AC093909.3-201ENST00000504783 336 ntBASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AC055811.3-201ENST00000584952 686 ntBASIC15.22■□□□□ 0.03
RNF135Q8IUD6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 CYP4F23P-201ENST00000593402 1579 ntBASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF135Q8IUD6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 LINC01815-202ENST00000641468 1409 ntBASIC15.21■□□□□ 0.03
RNF135Q8IUD6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC133540.1-201ENST00000620845 1019 ntBASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC027601.3-201ENST00000622907 509 ntBASIC15.21■□□□□ 0.03
RNF135Q8IUD6 AC011471.3-201ENST00000623576 402 ntBASIC15.21■□□□□ 0.03
RNF135Q8IUD6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF135Q8IUD6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 AC005912.2-201ENST00000619492 2400 ntBASIC15.21■□□□□ 0.02
RNF135Q8IUD6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF135Q8IUD6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AL138725.1-201ENST00000407347 1314 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AC140479.7-201ENST00000636301 2332 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 DPY19L2P5-201ENST00000456300 331 ntBASIC15.2■□□□□ 0.02
RNF135Q8IUD6 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF135Q8IUD6 AC027139.1-201ENST00000565286 951 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms