Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AP000911.2-201ENST00000534330 502 ntBASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 MARK2P9-201ENST00000430958 1727 ntBASIC17.09■□□□□ 0.33
RFX7Q2KHR2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX7Q2KHR2 AL928654.5-201ENST00000624831 2501 ntBASIC17.09■□□□□ 0.33
RFX7Q2KHR2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.08■□□□□ 0.33
RFX7Q2KHR2 SALL4P6-201ENST00000429385 1691 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 HIST2H2BA-201ENST00000412169 381 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AC079112.1-201ENST00000454972 939 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AC005740.1-201ENST00000515639 522 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AC067931.2-201ENST00000623655 2003 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AC111170.3-201ENST00000624282 2464 ntBASIC17.08■□□□□ 0.32
RFX7Q2KHR2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX7Q2KHR2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC006987.1-201ENST00000413610 527 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 LYPLA2P1-203ENST00000447689 696 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 NDUFB10P1-201ENST00000567319 521 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 RN7SL665P-201ENST00000578793 300 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 MIR2392-201ENST00000584881 84 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC107464.3-201ENST00000609172 737 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC087392.5-201ENST00000612517 489 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 IL9RP3-201ENST00000442856 1674 ntBASIC17.07■□□□□ 0.32
RFX7Q2KHR2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms