Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.38□□□□□ -0.43
ACTBP60709 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 SLC7A15P-201ENST00000424028 1363 ntBASIC12.38□□□□□ -0.43
ACTBP60709 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ACTBP60709 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ACTBP60709 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
ACTBP60709 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ACTBP60709 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ACTBP60709 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
ACTBP60709 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ACTBP60709 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
ACTBP60709 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AGAP12P-201ENST00000585227 2359 ntBASIC12.37□□□□□ -0.43
ACTBP60709 Z98257.2-202ENST00000641138 1548 ntBASIC12.37□□□□□ -0.43
ACTBP60709 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 AL359845.1-201ENST00000458202 1648 ntBASIC12.37□□□□□ -0.43
ACTBP60709 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ACTBP60709 AL022313.4-201ENST00000562756 2046 ntBASIC12.37□□□□□ -0.43
ACTBP60709 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ACTBP60709 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.37□□□□□ -0.43
ACTBP60709 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.37□□□□□ -0.43
ACTBP60709 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.37□□□□□ -0.43
ACTBP60709 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.37□□□□□ -0.43
ACTBP60709 AC138761.1-201ENST00000584393 385 ntBASIC12.37□□□□□ -0.43
ACTBP60709 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.37□□□□□ -0.43
ACTBP60709 AL132655.2-201ENST00000596276 594 ntBASIC12.37□□□□□ -0.43
ACTBP60709 AC099568.2-201ENST00000609194 695 ntBASIC12.37□□□□□ -0.43
ACTBP60709 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.37□□□□□ -0.43
ACTBP60709 AC008761.3-201ENST00000624803 892 ntBASIC12.37□□□□□ -0.43
ACTBP60709 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AL391825.1-201ENST00000457671 1364 ntBASIC12.37□□□□□ -0.43
ACTBP60709 AC007541.1-201ENST00000570282 1469 ntBASIC12.37□□□□□ -0.43
ACTBP60709 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AL590440.2-201ENST00000641973 1595 ntBASIC12.37□□□□□ -0.43
ACTBP60709 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AC073869.1-201ENST00000415574 2762 ntBASIC12.37□□□□□ -0.43
ACTBP60709 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ACTBP60709 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
ACTBP60709 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ACTBP60709 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ACTBP60709 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 AC118758.2-201ENST00000614242 2813 ntBASIC12.37□□□□□ -0.43
ACTBP60709 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ACTBP60709 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ACTBP60709 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.36□□□□□ -0.43
ACTBP60709 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ACTBP60709 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ACTBP60709 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 307 ms