Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 AL671277.2-201ENST00000458060 996 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 RNA5SP410-201ENST00000516285 106 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-5P52952 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-5P52952 AC138894.3-201ENST00000603787 634 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-5P52952 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 ATF4P4-201ENST00000393544 1930 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-5P52952 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.11□□□□□ -0.47
NKX2-5P52952 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX2-5P52952 CHCHD2P8-201ENST00000429873 447 ntBASIC12.1□□□□□ -0.47
NKX2-5P52952 AK2P2-201ENST00000439142 405 ntBASIC12.1□□□□□ -0.47
NKX2-5P52952 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
NKX2-5P52952 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX2-5P52952 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX2-5P52952 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.1□□□□□ -0.47
NKX2-5P52952 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 AC006011.2-201ENST00000621313 1158 ntBASIC12.1□□□□□ -0.47
NKX2-5P52952 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
NKX2-5P52952 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-5P52952 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-5P52952 LINC02228-202ENST00000641261 2489 ntBASIC12.1□□□□□ -0.47
NKX2-5P52952 AL138709.1-201ENST00000614840 1693 ntBASIC12.1□□□□□ -0.47
NKX2-5P52952 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-5P52952 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-5P52952 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-5P52952 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-5P52952 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-5P52952 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-5P52952 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms