Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.41□□□□□ -0.26
NR4A1P22736 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NR4A1P22736 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.41□□□□□ -0.26
NR4A1P22736 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
NR4A1P22736 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 AL033527.5-201ENST00000641382 801 ntBASIC13.41□□□□□ -0.26
NR4A1P22736 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.41□□□□□ -0.26
NR4A1P22736 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 AP000437.1-201ENST00000624057 2085 ntBASIC13.41□□□□□ -0.26
NR4A1P22736 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 NCLP1-201ENST00000445357 1963 ntBASIC13.4□□□□□ -0.26
NR4A1P22736 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.4□□□□□ -0.26
NR4A1P22736 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
NR4A1P22736 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.4□□□□□ -0.26
NR4A1P22736 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.4□□□□□ -0.26
NR4A1P22736 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.4□□□□□ -0.26
NR4A1P22736 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
NR4A1P22736 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.4□□□□□ -0.26
NR4A1P22736 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.4□□□□□ -0.26
NR4A1P22736 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NR4A1P22736 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
NR4A1P22736 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 AL035252.4-201ENST00000624174 288 ntBASIC13.4□□□□□ -0.26
NR4A1P22736 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.4□□□□□ -0.26
NR4A1P22736 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NR4A1P22736 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NR4A1P22736 KHSRPP1-201ENST00000427983 1768 ntBASIC13.4□□□□□ -0.26
NR4A1P22736 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NR4A1P22736 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NR4A1P22736 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.39□□□□□ -0.27
NR4A1P22736 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NR4A1P22736 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NR4A1P22736 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.39□□□□□ -0.27
NR4A1P22736 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NR4A1P22736 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.39□□□□□ -0.27
NR4A1P22736 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.39□□□□□ -0.27
NR4A1P22736 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.39□□□□□ -0.27
NR4A1P22736 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NR4A1P22736 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.39□□□□□ -0.27
NR4A1P22736 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms