Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 KRT17P7-201ENST00000451704 1104 ntBASIC13.61□□□□□ -0.23
CCNA2P20248 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.61□□□□□ -0.23
CCNA2P20248 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.61□□□□□ -0.23
CCNA2P20248 AC008735.3-201ENST00000596646 500 ntBASIC13.61□□□□□ -0.23
CCNA2P20248 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CCNA2P20248 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
CCNA2P20248 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CCNA2P20248 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCNA2P20248 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CCNA2P20248 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
CCNA2P20248 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 AC007969.1-201ENST00000433675 447 ntBASIC13.6□□□□□ -0.23
CCNA2P20248 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNA2P20248 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNA2P20248 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNA2P20248 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.6□□□□□ -0.23
CCNA2P20248 CU639417.3-201ENST00000624240 1404 ntBASIC13.6□□□□□ -0.23
CCNA2P20248 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCNA2P20248 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCNA2P20248 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNA2P20248 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNA2P20248 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNA2P20248 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNA2P20248 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNA2P20248 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNA2P20248 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNA2P20248 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CCNA2P20248 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNA2P20248 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms