Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM198B-204ENST00000484016 896 ntBASIC14.48□□□□□ -0.09
VCLP18206 AC106794.1-201ENST00000506935 792 ntBASIC14.48□□□□□ -0.09
VCLP18206 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.48□□□□□ -0.09
VCLP18206 AC126915.1-201ENST00000522847 1038 ntBASIC14.48□□□□□ -0.09
VCLP18206 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.48□□□□□ -0.09
VCLP18206 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VCLP18206 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VCLP18206 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 E2F3P2-201ENST00000447755 1422 ntBASIC14.48□□□□□ -0.09
VCLP18206 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VCLP18206 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
VCLP18206 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VCLP18206 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VCLP18206 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VCLP18206 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.47□□□□□ -0.09
VCLP18206 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.47□□□□□ -0.09
VCLP18206 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
VCLP18206 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 MIR6074-201ENST00000612054 107 ntBASIC14.47□□□□□ -0.09
VCLP18206 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.47□□□□□ -0.09
VCLP18206 AL136295.7-201ENST00000619226 1200 ntBASIC14.47□□□□□ -0.09
VCLP18206 AL162426.1-201ENST00000624141 743 ntBASIC14.47□□□□□ -0.09
VCLP18206 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.47□□□□□ -0.09
VCLP18206 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VCLP18206 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.47□□□□□ -0.09
VCLP18206 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
VCLP18206 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.46□□□□□ -0.09
VCLP18206 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.46□□□□□ -0.09
VCLP18206 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VCLP18206 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.46□□□□□ -0.09
VCLP18206 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms