Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CYP3A4P08684 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CYP3A4P08684 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CYP3A4P08684 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.91■□□□□ 0.14
CYP3A4P08684 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.91■□□□□ 0.14
CYP3A4P08684 KRT18P8-201ENST00000581937 1246 ntBASIC15.91■□□□□ 0.14
CYP3A4P08684 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AC092171.5-201ENST00000608012 942 ntBASIC15.91■□□□□ 0.14
CYP3A4P08684 AC073352.2-201ENST00000609385 439 ntBASIC15.91■□□□□ 0.14
CYP3A4P08684 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CYP3A4P08684 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CYP3A4P08684 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CYP3A4P08684 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 AC011474.4-201ENST00000623523 2076 ntBASIC15.91■□□□□ 0.14
CYP3A4P08684 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 PDXDC2P-206ENST00000534700 1315 ntBASIC15.91■□□□□ 0.14
CYP3A4P08684 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYP3A4P08684 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.91■□□□□ 0.14
CYP3A4P08684 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CYP3A4P08684 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 MIR33B-201ENST00000385104 96 ntBASIC15.9■□□□□ 0.14
CYP3A4P08684 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CYP3A4P08684 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC078991.1-201ENST00000437297 610 ntBASIC15.9■□□□□ 0.14
CYP3A4P08684 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.9■□□□□ 0.14
CYP3A4P08684 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.9■□□□□ 0.14
CYP3A4P08684 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 RPL17P45-201ENST00000586289 509 ntBASIC15.9■□□□□ 0.14
CYP3A4P08684 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.9■□□□□ 0.14
CYP3A4P08684 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC087392.5-201ENST00000612517 489 ntBASIC15.9■□□□□ 0.14
CYP3A4P08684 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.9■□□□□ 0.14
CYP3A4P08684 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYP3A4P08684 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.89■□□□□ 0.14
CYP3A4P08684 AGAP10P-201ENST00000454844 2418 ntBASIC15.89■□□□□ 0.13
CYP3A4P08684 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYP3A4P08684 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.89■□□□□ 0.13
CYP3A4P08684 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CYP3A4P08684 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYP3A4P08684 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYP3A4P08684 AC019109.1-201ENST00000401725 1874 ntBASIC15.89■□□□□ 0.13
CYP3A4P08684 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYP3A4P08684 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.89■□□□□ 0.13
CYP3A4P08684 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYP3A4P08684 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CYP3A4P08684 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms