Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDGFBP01127 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.13□□□□□ -0.15
PDGFBP01127 U73169.1-201ENST00000395152 367 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.13□□□□□ -0.15
PDGFBP01127 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.13□□□□□ -0.15
PDGFBP01127 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.13□□□□□ -0.15
PDGFBP01127 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 RN7SL684P-201ENST00000465665 294 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 RN7SL523P-201ENST00000484401 298 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 SORD2P-201ENST00000558556 1069 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 CDC37P2-201ENST00000562287 1029 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 AL049840.2-201ENST00000602722 535 ntBASIC14.13□□□□□ -0.15
PDGFBP01127 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC14.13□□□□□ -0.15
PDGFBP01127 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.13□□□□□ -0.15
PDGFBP01127 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDGFBP01127 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDGFBP01127 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PDGFBP01127 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PDGFBP01127 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PDGFBP01127 AL121753.2-201ENST00000624581 1461 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 SALL4P6-201ENST00000429385 1691 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PDGFBP01127 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 RN7SKP212-201ENST00000410851 328 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 BX088651.3-201ENST00000418155 352 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 CCND3P1-201ENST00000438347 580 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 AP006248.1-201ENST00000610471 67 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.12□□□□□ -0.15
PDGFBP01127 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.12□□□□□ -0.15
PDGFBP01127 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 AL596257.1-201ENST00000641463 2694 ntBASIC14.12□□□□□ -0.15
PDGFBP01127 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDGFBP01127 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDGFBP01127 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.11□□□□□ -0.15
PDGFBP01127 GUCY2EP-203ENST00000531117 1918 ntBASIC14.11□□□□□ -0.15
PDGFBP01127 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDGFBP01127 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PDGFBP01127 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
PDGFBP01127 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.11□□□□□ -0.15
PDGFBP01127 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDGFBP01127 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDGFBP01127 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PDGFBP01127 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms