Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 AC005014.1-201ENST00000432006 2976 ntBASIC14.4□□□□□ -0.1
RFPL1O75677 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RFPL1O75677 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 MIR497HG-202ENST00000572453 3838 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL1O75677 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 AC006001.1-201ENST00000325130 474 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 BTBD6P1-201ENST00000412176 1267 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL1O75677 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 FAM197Y7-201ENST00000432892 766 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 AL035414.1-201ENST00000451327 857 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL1O75677 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL1O75677 ZNF767P-206ENST00000513792 565 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.39□□□□□ -0.11
RFPL1O75677 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 OR10B1P-201ENST00000601666 907 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFPL1O75677 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFPL1O75677 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 AHCYP2-201ENST00000430630 1300 ntBASIC14.39□□□□□ -0.11
RFPL1O75677 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFPL1O75677 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 AL391647.1-201ENST00000395664 511 ntBASIC14.38□□□□□ -0.11
RFPL1O75677 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFPL1O75677 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 AK2P2-201ENST00000439142 405 ntBASIC14.38□□□□□ -0.11
RFPL1O75677 AC104306.2-201ENST00000451877 341 ntBASIC14.38□□□□□ -0.11
RFPL1O75677 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.38□□□□□ -0.11
RFPL1O75677 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.38□□□□□ -0.11
RFPL1O75677 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.38□□□□□ -0.11
RFPL1O75677 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.38□□□□□ -0.11
RFPL1O75677 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms