Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC092978.1-202ENST00000637590 1327 ntBASIC18.13■□□□□ 0.49
CHL1O00533 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.13■□□□□ 0.49
CHL1O00533 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 AC111170.3-201ENST00000624282 2464 ntBASIC18.13■□□□□ 0.49
CHL1O00533 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHL1O00533 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHL1O00533 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 NORAD-201ENST00000565493 5339 ntBASIC18.12■□□□□ 0.49
CHL1O00533 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.12■□□□□ 0.49
CHL1O00533 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 OR52M2P-201ENST00000414298 959 ntBASIC18.12■□□□□ 0.49
CHL1O00533 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.12■□□□□ 0.49
CHL1O00533 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.12■□□□□ 0.49
CHL1O00533 RN7SL470P-201ENST00000583069 259 ntBASIC18.12■□□□□ 0.49
CHL1O00533 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 AL009176.1-201ENST00000607876 650 ntBASIC18.12■□□□□ 0.49
CHL1O00533 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.12■□□□□ 0.49
CHL1O00533 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.12■□□□□ 0.49
CHL1O00533 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.12■□□□□ 0.49
CHL1O00533 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHL1O00533 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHL1O00533 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 AC011474.4-201ENST00000623523 2076 ntBASIC18.11■□□□□ 0.49
CHL1O00533 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.11■□□□□ 0.49
CHL1O00533 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 RN7SKP109-201ENST00000410592 316 ntBASIC18.11■□□□□ 0.49
CHL1O00533 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.11■□□□□ 0.49
CHL1O00533 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.11■□□□□ 0.49
CHL1O00533 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
CHL1O00533 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 CR383656.3-201ENST00000551315 183 ntBASIC18.11■□□□□ 0.49
CHL1O00533 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CHL1O00533 NUDT4P2-201ENST00000578341 546 ntBASIC18.11■□□□□ 0.49
CHL1O00533 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.11■□□□□ 0.49
CHL1O00533 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.11■□□□□ 0.49
CHL1O00533 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHL1O00533 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHL1O00533 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.1■□□□□ 0.49
CHL1O00533 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHL1O00533 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHL1O00533 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHL1O00533 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHL1O00533 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.1■□□□□ 0.49
CHL1O00533 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHL1O00533 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms