Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RTN4IP1Q8WWV3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC139712.1-201ENST00000378256 1875 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM14DP-201ENST00000422205 345 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 C2orf27AP3-201ENST00000434123 579 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 BCRP2-202ENST00000447763 634 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 GCOM2-201ENST00000509133 1104 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 BCRP6-201ENST00000510112 632 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 BCRP7-201ENST00000511549 544 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC025279.2-201ENST00000569730 653 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 GNRHR2-203ENST00000581100 1187 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AL354718.3-201ENST00000616414 581 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 CR382287.1-201ENST00000623954 586 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 AC105233.6-201ENST00000642093 218 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 NCLP1-201ENST00000445357 1963 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 Z82170.1-201ENST00000625081 3192 ntBASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RTN4IP1Q8WWV3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 CLUHP2-201ENST00000426660 1303 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AC083964.2-201ENST00000623988 2396 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 TPM3P8-201ENST00000330554 643 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 POM121L8P-201ENST00000417732 1281 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 POM121L9P-203ENST00000441984 1285 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 BTNL10-201ENST00000595971 695 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 LINC02084-201ENST00000606069 1096 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 AC132938.4-201ENST00000623835 848 ntBASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.13□□□□□ -0.47
RTN4IP1Q8WWV3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms