Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 AL139158.3-201ENST00000641212 1562 ntBASIC16.99■□□□□ 0.31
SNED1Q8TER0 AC097359.2-201ENST00000604992 2389 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 RPL18AP16-201ENST00000424057 531 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 AL136084.1-201ENST00000449172 318 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 AC004801.1-201ENST00000549557 360 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 FAM187B2P-201ENST00000577135 713 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 CSTP2-201ENST00000610599 398 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 AC110057.1-201ENST00000636031 898 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 Z98885.3-201ENST00000624882 1757 ntBASIC16.98■□□□□ 0.31
SNED1Q8TER0 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SNED1Q8TER0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNED1Q8TER0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AC091304.3-201ENST00000566500 716 ntBASIC16.97■□□□□ 0.31
SNED1Q8TER0 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 KF455155.1-201ENST00000604493 303 ntBASIC16.97■□□□□ 0.31
SNED1Q8TER0 AC005746.3-201ENST00000614751 393 ntBASIC16.97■□□□□ 0.31
SNED1Q8TER0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNED1Q8TER0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
SNED1Q8TER0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 KRT18P33-201ENST00000398525 1043 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 HMGA1P1-201ENST00000415560 1062 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 AC079250.1-201ENST00000456046 531 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 RN7SL602P-201ENST00000578326 324 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 RN7SL718P-201ENST00000581254 303 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 MIR4326-201ENST00000582203 59 ntBASIC16.96■□□□□ 0.31
SNED1Q8TER0 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms