Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
C11orf88Q6PI97 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AL512384.1-201ENST00000406683 331 ntBASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GIMAP3P-201ENST00000495150 836 ntBASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC104596.2-201ENST00000512793 793 ntBASIC12.63□□□□□ -0.39
C11orf88Q6PI97 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC093726.1-201ENST00000608064 963 ntBASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
C11orf88Q6PI97 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.62□□□□□ -0.39
C11orf88Q6PI97 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms