Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC006486.2-201ENST00000624246 2199 ntBASIC16.75■□□□□ 0.27
IRX3P78415 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 AC027601.5-201ENST00000624065 2482 ntBASIC16.75■□□□□ 0.27
IRX3P78415 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 AC015688.4-201ENST00000580780 1647 ntBASIC16.74■□□□□ 0.27
IRX3P78415 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
IRX3P78415 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 LINC00528-201ENST00000600723 2160 ntBASIC16.74■□□□□ 0.27
IRX3P78415 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
IRX3P78415 AC004837.1-201ENST00000446267 564 ntBASIC16.74■□□□□ 0.27
IRX3P78415 LYPLA2P1-203ENST00000447689 696 ntBASIC16.74■□□□□ 0.27
IRX3P78415 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.74■□□□□ 0.27
IRX3P78415 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 AL157792.1-201ENST00000488281 530 ntBASIC16.74■□□□□ 0.27
IRX3P78415 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX3P78415 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.74■□□□□ 0.27
IRX3P78415 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.74■□□□□ 0.27
IRX3P78415 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 AC090502.4-201ENST00000551714 1386 ntBASIC16.74■□□□□ 0.27
IRX3P78415 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX3P78415 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 KHSRPP1-201ENST00000427983 1768 ntBASIC16.74■□□□□ 0.27
IRX3P78415 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX3P78415 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX3P78415 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 AC013268.4-201ENST00000637413 2228 ntBASIC16.73■□□□□ 0.27
IRX3P78415 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
IRX3P78415 CR383656.3-201ENST00000551315 183 ntBASIC16.73■□□□□ 0.27
IRX3P78415 AC027237.1-201ENST00000560942 655 ntBASIC16.73■□□□□ 0.27
IRX3P78415 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX3P78415 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX3P78415 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 AP000322.3-201ENST00000608665 388 ntBASIC16.73■□□□□ 0.27
IRX3P78415 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
IRX3P78415 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX3P78415 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX3P78415 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX3P78415 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
IRX3P78415 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX3P78415 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms