Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM23P36406 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM23P36406 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM23P36406 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 AP000356.3-201ENST00000382243 753 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 AC069218.1-201ENST00000435269 762 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 AC078991.1-201ENST00000437297 610 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.04□□□□□ -0.16
TRIM23P36406 AC098935.1-201ENST00000446057 611 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 ORAOV1P1-201ENST00000503108 395 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 GOLGA2P8-201ENST00000505201 779 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 MRPL22P1-201ENST00000505398 616 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
TRIM23P36406 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM23P36406 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 MIR3147-201ENST00000577811 66 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 SPCS2P2-201ENST00000603270 608 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 AC092171.5-201ENST00000608012 942 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 AL021707.6-201ENST00000609212 491 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 YRDCP1-201ENST00000621419 643 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM23P36406 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM23P36406 AC007326.2-201ENST00000624224 7579 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM23P36406 AL591122.2-201ENST00000624125 1853 ntBASIC14.04□□□□□ -0.16
TRIM23P36406 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM23P36406 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM23P36406 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 AC015656.1-201ENST00000624209 3578 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 MIR600HG-201ENST00000449175 5984 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 HLA-DMA-203ENST00000395305 777 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 LINC00265-2P-201ENST00000413372 782 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 AL512306.1-201ENST00000432698 848 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 AC018638.5-201ENST00000450885 754 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.03□□□□□ -0.16
TRIM23P36406 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 DNM1P30-201ENST00000563586 452 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 RN7SL455P-201ENST00000580629 282 ntBASIC14.03□□□□□ -0.16
TRIM23P36406 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM23P36406 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRIM23P36406 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.03□□□□□ -0.16
TRIM23P36406 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRIM23P36406 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.03□□□□□ -0.16
TRIM23P36406 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRIM23P36406 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms