Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SHC1P1-201ENST00000425230 1745 ntBASIC13.39□□□□□ -0.27
PRKCAP17252 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRKCAP17252 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
PRKCAP17252 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRKCAP17252 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRKCAP17252 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.39□□□□□ -0.27
PRKCAP17252 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.39□□□□□ -0.27
PRKCAP17252 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRKCAP17252 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
PRKCAP17252 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PRKCAP17252 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 BNIP3P42-201ENST00000454982 569 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.38□□□□□ -0.27
PRKCAP17252 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.38□□□□□ -0.27
PRKCAP17252 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
PRKCAP17252 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 RNA5SP412-201ENST00000516234 123 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 MIR4741-201ENST00000579822 90 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 BNIP3P29-201ENST00000598302 571 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 AC011447.5-201ENST00000616168 564 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.38□□□□□ -0.27
PRKCAP17252 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
PRKCAP17252 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PRKCAP17252 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.38□□□□□ -0.27
PRKCAP17252 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PRKCAP17252 DMBT1P1-203ENST00000636837 4628 ntBASIC13.38□□□□□ -0.27
PRKCAP17252 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PRKCAP17252 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRKCAP17252 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.38□□□□□ -0.27
PRKCAP17252 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 AC130686.1-201ENST00000622936 2466 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
PRKCAP17252 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PRKCAP17252 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 MIR326-201ENST00000362220 95 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.37□□□□□ -0.27
PRKCAP17252 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 AC079178.1-201ENST00000420915 656 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRKCAP17252 CICP12-201ENST00000455801 843 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 EEF1DP1-201ENST00000585891 896 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 AC010328.2-201ENST00000597698 1111 ntBASIC13.37□□□□□ -0.27
PRKCAP17252 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.37□□□□□ -0.27
PRKCAP17252 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.37□□□□□ -0.27
PRKCAP17252 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms