Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 FOXO3B-201ENST00000395675 1928 ntBASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP4B1Q9Y6B7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP4B1Q9Y6B7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 SLC25A24-204ENST00000569674 2357 ntBASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 AC019171.1-201ENST00000601251 1056 ntBASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP4B1Q9Y6B7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 AL137060.1-201ENST00000618151 2648 ntBASIC21.52■■□□□ 1.04
AP4B1Q9Y6B7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 LONRF2P2-201ENST00000439212 571 ntBASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 AC010980.1-201ENST00000587192 1142 ntBASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.51■■□□□ 1.03
AP4B1Q9Y6B7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 ANOS2P-203ENST00000472227 1816 ntBASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
AP4B1Q9Y6B7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.49■■□□□ 1.03
AP4B1Q9Y6B7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP4B1Q9Y6B7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms