Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.8■□□□□ 0.92
HRH3Q9Y5N1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 AC141586.4-201ENST00000624558 1573 ntBASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HRH3Q9Y5N1 AL161729.1-201ENST00000604104 1402 ntBASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HRH3Q9Y5N1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HRH3Q9Y5N1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HRH3Q9Y5N1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HRH3Q9Y5N1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 AC005703.6-201ENST00000623265 1329 ntBASIC20.75■□□□□ 0.91
HRH3Q9Y5N1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 AC133561.4-201ENST00000566112 224 ntBASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HRH3Q9Y5N1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HRH3Q9Y5N1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HRH3Q9Y5N1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HRH3Q9Y5N1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms