Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 IRS3P-201ENST00000223076 1006 ntBASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 AC022211.4-201ENST00000625094 2161 ntBASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA9Q9Y5G4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGA9Q9Y5G4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA9Q9Y5G4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGA9Q9Y5G4 AL022069.1-201ENST00000568025 1636 ntBASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 AC008764.7-201ENST00000593779 1081 ntBASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 AC087623.3-201ENST00000607047 1098 ntBASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 AC136469.2-201ENST00000623944 1028 ntBASIC21.07■□□□□ 0.96
PCDHGA9Q9Y5G4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 C17orf82-201ENST00000623772 1530 ntBASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 AC099791.1-201ENST00000416440 715 ntBASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 AL162430.1-201ENST00000480705 870 ntBASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA9Q9Y5G4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA9Q9Y5G4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 MIR6089-201ENST00000616698 64 ntBASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA9Q9Y5G4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA9Q9Y5G4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA9Q9Y5G4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PCDHGA9Q9Y5G4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA9Q9Y5G4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms