Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 AC139795.1-202ENST00000500444 432 ntBASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB4Q9UN71 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 ABHD17AP5-201ENST00000580133 923 ntBASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB4Q9UN71 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 C1orf229-201ENST00000623686 2258 ntBASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB4Q9UN71 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB4Q9UN71 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGB4Q9UN71 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 AC022616.5-201ENST00000518796 181 ntBASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 AC011551.1-201ENST00000614101 683 ntBASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.7■■□□□ 1.06
PCDHGB4Q9UN71 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 NTF6A-201ENST00000591175 560 ntBASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 AL022069.1-201ENST00000568025 1636 ntBASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB4Q9UN71 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 AC019171.1-201ENST00000601251 1056 ntBASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB4Q9UN71 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms