Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
NOTCH3Q9UM47 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 BX842568.3-201ENST00000418104 571 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L2-201ENST00000561772 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 AC092437.1-201ENST00000624794 1048 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L6-201ENST00000626483 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L1-201ENST00000627662 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L8-201ENST00000629013 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L3-201ENST00000630187 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L7-201ENST00000630678 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DUX4L5-201ENST00000630834 1275 ntBASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NOTCH3Q9UM47 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 AL022069.1-201ENST00000568025 1636 ntBASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.28■□□□□ 0.36
NOTCH3Q9UM47 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 AL031602.1-201ENST00000633169 911 ntBASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NOTCH3Q9UM47 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
NOTCH3Q9UM47 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 MIR3181-201ENST00000578512 73 ntBASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 AC092171.4-201ENST00000609130 632 ntBASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 AC136469.2-201ENST00000623944 1028 ntBASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NOTCH3Q9UM47 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NOTCH3Q9UM47 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NOTCH3Q9UM47 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms