Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
KRTAP3-3Q9BYR6 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC13.76□□□□□ -0.21
KRTAP3-3Q9BYR6 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC13.76□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC00852-201ENST00000475197 1328 ntBASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 MTATP6P11-201ENST00000428071 670 ntBASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC104685.1-201ENST00000502445 371 ntBASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AC092354.2-201ENST00000607786 514 ntBASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AP003072.3-201ENST00000623456 594 ntBASIC13.75□□□□□ -0.21
KRTAP3-3Q9BYR6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 SLC10A5P1-201ENST00000379063 1306 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 Y_RNA.604-201ENST00000410574 102 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AL031779.1-201ENST00000415663 330 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AC140725.3-201ENST00000616193 880 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AL158163.2-201ENST00000619110 700 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 AL603839.4-201ENST00000624658 1005 ntBASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-3Q9BYR6 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 RNASEH2B-AS1-201ENST00000454605 1007 ntTSL 3 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 AC009090.3-201ENST00000616553 565 ntBASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC13.73□□□□□ -0.21
KRTAP3-3Q9BYR6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AL354892.3-201ENST00000586101 1630 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 RFESDP1-201ENST00000422350 461 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 PRELID3BP10-201ENST00000431957 584 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 MTND3P10-201ENST00000450967 341 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC109464.1-201ENST00000511091 819 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC098679.3-203ENST00000514881 919 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 Y_RNA.717-201ENST00000517106 92 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AL137802.2-201ENST00000562878 1110 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC016839.1-201ENST00000578162 867 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 AC253576.2-201ENST00000618815 580 ntBASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-3Q9BYR6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC099063.2-201ENST00000446360 662 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC068987.2-201ENST00000565518 896 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC099518.2-201ENST00000565802 704 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC007599.1-201ENST00000568688 1174 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 AF186192.2-204ENST00000581667 524 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 BNIP3P27-201ENST00000599991 412 ntBASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC13.71□□□□□ -0.21
KRTAP3-3Q9BYR6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms