Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 AL137784.2-201ENST00000607332 1000 ntBASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.8■■■□□ 2.04
RTFDC1Q9BY42 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 AC123595.1-201ENST00000440769 1046 ntBASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.79■■■□□ 2.04
RTFDC1Q9BY42 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 AL358852.1-201ENST00000623174 1268 ntBASIC27.78■■■□□ 2.04
RTFDC1Q9BY42 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 AC141586.4-201ENST00000624558 1573 ntBASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTFDC1Q9BY42 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RTFDC1Q9BY42 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.76■■■□□ 2.04
RTFDC1Q9BY42 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
RTFDC1Q9BY42 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.75■■■□□ 2.03
RTFDC1Q9BY42 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RTFDC1Q9BY42 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.75■■■□□ 2.03
RTFDC1Q9BY42 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RTFDC1Q9BY42 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RTFDC1Q9BY42 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RTFDC1Q9BY42 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.74■■■□□ 2.03
RTFDC1Q9BY42 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.74■■■□□ 2.03
RTFDC1Q9BY42 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
RTFDC1Q9BY42 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 MIR572-201ENST00000384983 95 ntBASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 IGHV3-19-201ENST00000521488 291 ntBASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.73■■■□□ 2.03
RTFDC1Q9BY42 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RTFDC1Q9BY42 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTFDC1Q9BY42 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
RTFDC1Q9BY42 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RTFDC1Q9BY42 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.7■■■□□ 2.03
RTFDC1Q9BY42 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
RTFDC1Q9BY42 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.7■■■□□ 2.02
RTFDC1Q9BY42 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.7■■■□□ 2.02
RTFDC1Q9BY42 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.7■■■□□ 2.02
RTFDC1Q9BY42 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RTFDC1Q9BY42 ALDH1A3-203ENST00000557963 1670 ntBASIC27.69■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms