Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
PRPF18Q99633 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PRPF18Q99633 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.78■■□□□ 1.08
PRPF18Q99633 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF18Q99633 DUX4L18-201ENST00000553347 1267 ntBASIC21.78■■□□□ 1.08
PRPF18Q99633 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRPF18Q99633 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PRPF18Q99633 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.78■■□□□ 1.08
PRPF18Q99633 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 BHLHE23-202ENST00000612929 1109 ntBASIC21.77■■□□□ 1.08
PRPF18Q99633 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRPF18Q99633 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PRPF18Q99633 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF18Q99633 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF18Q99633 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF18Q99633 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.76■■□□□ 1.07
PRPF18Q99633 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.76■■□□□ 1.07
PRPF18Q99633 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.76■■□□□ 1.07
PRPF18Q99633 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF18Q99633 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF18Q99633 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
PRPF18Q99633 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
PRPF18Q99633 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRPF18Q99633 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.75■■□□□ 1.07
PRPF18Q99633 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 AC074183.2-201ENST00000623112 922 ntBASIC21.75■■□□□ 1.07
PRPF18Q99633 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRPF18Q99633 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PRPF18Q99633 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.74■■□□□ 1.07
PRPF18Q99633 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PRPF18Q99633 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRPF18Q99633 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.74■■□□□ 1.07
PRPF18Q99633 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRPF18Q99633 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF18Q99633 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRPF18Q99633 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF18Q99633 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.73■■□□□ 1.07
PRPF18Q99633 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF18Q99633 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF18Q99633 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRPF18Q99633 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.73■■□□□ 1.07
PRPF18Q99633 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF18Q99633 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF18Q99633 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF18Q99633 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF18Q99633 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF18Q99633 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF18Q99633 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF18Q99633 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF18Q99633 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
PRPF18Q99633 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF18Q99633 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF18Q99633 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRPF18Q99633 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF18Q99633 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF18Q99633 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF18Q99633 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF18Q99633 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PRPF18Q99633 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF18Q99633 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.7■■□□□ 1.06
PRPF18Q99633 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF18Q99633 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms