Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.6■□□□□ 0.41
TRGV9Q99603 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRGV9Q99603 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRGV9Q99603 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TRGV9Q99603 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV9Q99603 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRGV9Q99603 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV9Q99603 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.59■□□□□ 0.41
TRGV9Q99603 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRGV9Q99603 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV9Q99603 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
TRGV9Q99603 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV9Q99603 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.58■□□□□ 0.41
TRGV9Q99603 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV9Q99603 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.58■□□□□ 0.41
TRGV9Q99603 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
TRGV9Q99603 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRGV9Q99603 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.58■□□□□ 0.4
TRGV9Q99603 AC120024.1-201ENST00000562672 995 ntBASIC17.58■□□□□ 0.4
TRGV9Q99603 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRGV9Q99603 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRGV9Q99603 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.57■□□□□ 0.4
TRGV9Q99603 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.57■□□□□ 0.4
TRGV9Q99603 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV9Q99603 GUSBP5-202ENST00000510805 1989 ntBASIC17.57■□□□□ 0.4
TRGV9Q99603 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRGV9Q99603 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRGV9Q99603 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRGV9Q99603 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV9Q99603 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV9Q99603 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV9Q99603 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV9Q99603 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV9Q99603 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.56■□□□□ 0.4
TRGV9Q99603 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.56■□□□□ 0.4
TRGV9Q99603 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.56■□□□□ 0.4
TRGV9Q99603 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TRGV9Q99603 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TRGV9Q99603 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV9Q99603 KRT18P24-201ENST00000344739 1156 ntBASIC17.55■□□□□ 0.4
TRGV9Q99603 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV9Q99603 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 DUX4L18-201ENST00000553347 1267 ntBASIC17.55■□□□□ 0.4
TRGV9Q99603 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.55■□□□□ 0.4
TRGV9Q99603 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.55■□□□□ 0.4
TRGV9Q99603 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRGV9Q99603 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV9Q99603 ESRRAP2-201ENST00000418437 1549 ntBASIC17.55■□□□□ 0.4
TRGV9Q99603 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.54■□□□□ 0.4
TRGV9Q99603 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRGV9Q99603 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.54■□□□□ 0.4
TRGV9Q99603 ABHD17AP5-201ENST00000580133 923 ntBASIC17.54■□□□□ 0.4
TRGV9Q99603 AC074183.2-201ENST00000623112 922 ntBASIC17.54■□□□□ 0.4
TRGV9Q99603 ECEL1P1-201ENST00000373592 1742 ntBASIC17.54■□□□□ 0.4
TRGV9Q99603 LINC00526-201ENST00000581067 1875 ntBASIC17.54■□□□□ 0.4
TRGV9Q99603 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV9Q99603 AC079630.1-202ENST00000618127 1840 ntBASIC17.54■□□□□ 0.4
TRGV9Q99603 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.53■□□□□ 0.4
TRGV9Q99603 AF131216.4-201ENST00000638924 1588 ntBASIC17.53■□□□□ 0.4
TRGV9Q99603 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV9Q99603 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV9Q99603 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRGV9Q99603 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV9Q99603 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRGV9Q99603 MIR4281-201ENST00000580852 62 ntBASIC17.53■□□□□ 0.4
TRGV9Q99603 THA1P-201ENST00000590384 1145 ntBASIC17.53■□□□□ 0.4
TRGV9Q99603 NTF6A-201ENST00000591175 560 ntBASIC17.53■□□□□ 0.4
TRGV9Q99603 BHLHE23-202ENST00000612929 1109 ntBASIC17.53■□□□□ 0.4
TRGV9Q99603 EP400NL-214ENST00000641289 2402 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms