Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A4EQ96PG1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A4EQ96PG1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MS4A4EQ96PG1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.08■□□□□ 0.96
MS4A4EQ96PG1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.08■□□□□ 0.96
MS4A4EQ96PG1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.08■□□□□ 0.96
MS4A4EQ96PG1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 MIR4787-201ENST00000607364 84 ntBASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A4EQ96PG1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 AC005703.6-201ENST00000623265 1329 ntBASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 AC239859.2-201ENST00000444165 318 ntBASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A4EQ96PG1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 MTDHP2-201ENST00000601468 714 ntBASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A4EQ96PG1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MS4A4EQ96PG1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.03■□□□□ 0.96
MS4A4EQ96PG1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MS4A4EQ96PG1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
MS4A4EQ96PG1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MS4A4EQ96PG1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MS4A4EQ96PG1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 AC079630.1-202ENST00000618127 1840 ntBASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
MS4A4EQ96PG1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 AC068473.5-201ENST00000616428 2072 ntBASIC21■□□□□ 0.95
MS4A4EQ96PG1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
MS4A4EQ96PG1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MS4A4EQ96PG1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms