Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 NTF6G-201ENST00000591094 616 ntBASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 MIR6084-201ENST00000622012 110 ntBASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NECTIN4Q96NY8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.6■■□□□ 1.37
NECTIN4Q96NY8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 KRT18P14-201ENST00000534205 1250 ntBASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 LINC02228-203ENST00000641970 1355 ntBASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 AC092803.2-201ENST00000564287 1899 ntBASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.59■■□□□ 1.37
NECTIN4Q96NY8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NECTIN4Q96NY8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NECTIN4Q96NY8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 TERF1P2-201ENST00000583350 1212 ntBASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NECTIN4Q96NY8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NECTIN4Q96NY8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.55■■□□□ 1.36
NECTIN4Q96NY8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NECTIN4Q96NY8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NECTIN4Q96NY8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NECTIN4Q96NY8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.52■■□□□ 1.36
NECTIN4Q96NY8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NECTIN4Q96NY8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NECTIN4Q96NY8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms