Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.74■□□□□ 0.75
SPTSSAQ969W0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTSSAQ969W0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPTSSAQ969W0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 AC021242.3-201ENST00000607598 1377 ntBASIC19.71■□□□□ 0.75
SPTSSAQ969W0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 KRT125P-201ENST00000546827 989 ntBASIC19.71■□□□□ 0.75
SPTSSAQ969W0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPTSSAQ969W0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPTSSAQ969W0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 RARRES2P1-201ENST00000474487 481 ntBASIC19.69■□□□□ 0.74
SPTSSAQ969W0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 Z92544.1-202ENST00000571933 1220 ntBASIC19.69■□□□□ 0.74
SPTSSAQ969W0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPTSSAQ969W0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 AC012676.1-201ENST00000574705 1949 ntBASIC19.68■□□□□ 0.74
SPTSSAQ969W0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.68■□□□□ 0.74
SPTSSAQ969W0 DUSP8P3-201ENST00000399571 1760 ntBASIC19.67■□□□□ 0.74
SPTSSAQ969W0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms