Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 LINC02228-203ENST00000641970 1355 ntBASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNIP1Q8TAD8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNIP1Q8TAD8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNIP1Q8TAD8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 AC135731.1-201ENST00000569415 2548 ntBASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 ERN1-208ENST00000606895 2068 ntBASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNIP1Q8TAD8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.33■■□□□ 1.01
SNIP1Q8TAD8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SNIP1Q8TAD8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.33■■□□□ 1
SNIP1Q8TAD8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
SNIP1Q8TAD8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
SNIP1Q8TAD8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SNIP1Q8TAD8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNIP1Q8TAD8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.32■■□□□ 1
SNIP1Q8TAD8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNIP1Q8TAD8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNIP1Q8TAD8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNIP1Q8TAD8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNIP1Q8TAD8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 AC080038.1-201ENST00000611274 1154 ntBASIC21.31■■□□□ 1
SNIP1Q8TAD8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SNIP1Q8TAD8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.31■■□□□ 1
SNIP1Q8TAD8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNIP1Q8TAD8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNIP1Q8TAD8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNIP1Q8TAD8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.3■■□□□ 1
SNIP1Q8TAD8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNIP1Q8TAD8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SNIP1Q8TAD8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 ABHD17AP1-201ENST00000358206 933 ntBASIC21.29■■□□□ 1
SNIP1Q8TAD8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNIP1Q8TAD8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNIP1Q8TAD8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNIP1Q8TAD8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.29■■□□□ 1
SNIP1Q8TAD8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNIP1Q8TAD8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms