Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NUP43Q8NFH3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
NUP43Q8NFH3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 AC009299.2-201ENST00000482477 511 ntBASIC21.12■□□□□ 0.97
NUP43Q8NFH3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 AL451085.2-201ENST00000605085 799 ntBASIC21.12■□□□□ 0.97
NUP43Q8NFH3 AC092028.1-203ENST00000608262 953 ntBASIC21.12■□□□□ 0.97
NUP43Q8NFH3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NUP43Q8NFH3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 AC239859.2-201ENST00000444165 318 ntBASIC21.11■□□□□ 0.97
NUP43Q8NFH3 MIR4787-201ENST00000607364 84 ntBASIC21.11■□□□□ 0.97
NUP43Q8NFH3 MIR6722-201ENST00000617286 78 ntBASIC21.11■□□□□ 0.97
NUP43Q8NFH3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NUP43Q8NFH3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.1■□□□□ 0.97
NUP43Q8NFH3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUP43Q8NFH3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.08■□□□□ 0.97
NUP43Q8NFH3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NUP43Q8NFH3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.08■□□□□ 0.96
NUP43Q8NFH3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NUP43Q8NFH3 AC068473.5-201ENST00000616428 2072 ntBASIC21.08■□□□□ 0.96
NUP43Q8NFH3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.07■□□□□ 0.96
NUP43Q8NFH3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 C9orf163-202ENST00000624034 2573 ntBASIC21.07■□□□□ 0.96
NUP43Q8NFH3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
NUP43Q8NFH3 AC005703.6-201ENST00000623265 1329 ntBASIC21.06■□□□□ 0.96
NUP43Q8NFH3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUP43Q8NFH3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
NUP43Q8NFH3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.06■□□□□ 0.96
NUP43Q8NFH3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUP43Q8NFH3 AC079630.1-202ENST00000618127 1840 ntBASIC21.06■□□□□ 0.96
NUP43Q8NFH3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
NUP43Q8NFH3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUP43Q8NFH3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms