Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIML2Q8N7C3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIML2Q8N7C3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 AC011551.1-201ENST00000614101 683 ntBASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIML2Q8N7C3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIML2Q8N7C3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIML2Q8N7C3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIML2Q8N7C3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 KRT18P60-201ENST00000312876 1297 ntBASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIML2Q8N7C3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 AL022069.1-201ENST00000568025 1636 ntBASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 AC022616.5-201ENST00000518796 181 ntBASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIML2Q8N7C3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 AC139795.1-202ENST00000500444 432 ntBASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIML2Q8N7C3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 AC019171.1-201ENST00000601251 1056 ntBASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIML2Q8N7C3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms