Protein–RNA interactions for Protein: Q8N135

LGI4, Leucine-rich repeat LGI family member 4, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI4Q8N135 MIR6722-201ENST00000617286 78 ntBASIC21.46■■□□□ 1.03
LGI4Q8N135 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LGI4Q8N135 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LGI4Q8N135 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LGI4Q8N135 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LGI4Q8N135 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.45■■□□□ 1.02
LGI4Q8N135 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.45■■□□□ 1.02
LGI4Q8N135 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.45■■□□□ 1.02
LGI4Q8N135 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.45■■□□□ 1.02
LGI4Q8N135 SNX5-217ENST00000606557 1087 ntBASIC21.45■■□□□ 1.02
LGI4Q8N135 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LGI4Q8N135 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
LGI4Q8N135 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LGI4Q8N135 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LGI4Q8N135 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.44■■□□□ 1.02
LGI4Q8N135 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.44■■□□□ 1.02
LGI4Q8N135 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.44■■□□□ 1.02
LGI4Q8N135 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.44■■□□□ 1.02
LGI4Q8N135 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LGI4Q8N135 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LGI4Q8N135 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LGI4Q8N135 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LGI4Q8N135 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.43■■□□□ 1.02
LGI4Q8N135 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.43■■□□□ 1.02
LGI4Q8N135 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.43■■□□□ 1.02
LGI4Q8N135 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LGI4Q8N135 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LGI4Q8N135 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LGI4Q8N135 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.42■■□□□ 1.02
LGI4Q8N135 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LGI4Q8N135 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LGI4Q8N135 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.42■■□□□ 1.02
LGI4Q8N135 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LGI4Q8N135 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
LGI4Q8N135 MIR3621-201ENST00000580529 85 ntBASIC21.42■■□□□ 1.02
LGI4Q8N135 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.42■■□□□ 1.02
LGI4Q8N135 AC008406.3-201ENST00000620001 1374 ntBASIC21.42■■□□□ 1.02
LGI4Q8N135 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.41■■□□□ 1.02
LGI4Q8N135 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 AL117332.1-201ENST00000622628 974 ntBASIC21.41■■□□□ 1.02
LGI4Q8N135 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LGI4Q8N135 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 AL022069.1-201ENST00000568025 1636 ntBASIC21.4■■□□□ 1.02
LGI4Q8N135 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.4■■□□□ 1.02
LGI4Q8N135 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.4■■□□□ 1.02
LGI4Q8N135 AL356740.2-201ENST00000601559 647 ntBASIC21.4■■□□□ 1.02
LGI4Q8N135 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.4■■□□□ 1.02
LGI4Q8N135 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.4■■□□□ 1.02
LGI4Q8N135 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.4■■□□□ 1.02
LGI4Q8N135 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LGI4Q8N135 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LGI4Q8N135 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.39■■□□□ 1.02
LGI4Q8N135 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.39■■□□□ 1.01
LGI4Q8N135 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.39■■□□□ 1.01
LGI4Q8N135 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.39■■□□□ 1.01
LGI4Q8N135 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.39■■□□□ 1.01
LGI4Q8N135 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LGI4Q8N135 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.39■■□□□ 1.01
LGI4Q8N135 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LGI4Q8N135 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
LGI4Q8N135 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LGI4Q8N135 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 AC079834.2-201ENST00000609776 1949 ntBASIC21.38■■□□□ 1.01
LGI4Q8N135 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.38■■□□□ 1.01
LGI4Q8N135 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 AC004448.1-201ENST00000458332 883 ntBASIC21.38■■□□□ 1.01
LGI4Q8N135 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.38■■□□□ 1.01
LGI4Q8N135 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.38■■□□□ 1.01
LGI4Q8N135 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.38■■□□□ 1.01
LGI4Q8N135 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.38■■□□□ 1.01
LGI4Q8N135 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LGI4Q8N135 C9orf163-202ENST00000624034 2573 ntBASIC21.38■■□□□ 1.01
LGI4Q8N135 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
LGI4Q8N135 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LGI4Q8N135 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LGI4Q8N135 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LGI4Q8N135 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LGI4Q8N135 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.37■■□□□ 1.01
LGI4Q8N135 AC131274.2-201ENST00000580697 1507 ntBASIC21.37■■□□□ 1.01
LGI4Q8N135 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LGI4Q8N135 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LGI4Q8N135 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
LGI4Q8N135 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms