Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM59Q8IWR1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
TRIM59Q8IWR1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 AC079630.1-202ENST00000618127 1840 ntBASIC24.61■■□□□ 1.53
TRIM59Q8IWR1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM59Q8IWR1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
TRIM59Q8IWR1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM59Q8IWR1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM59Q8IWR1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM59Q8IWR1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM59Q8IWR1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 BX664725.1-201ENST00000438252 379 ntBASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM59Q8IWR1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TRIM59Q8IWR1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.58■■□□□ 1.52
TRIM59Q8IWR1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TRIM59Q8IWR1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 RARRES2P1-201ENST00000474487 481 ntBASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM59Q8IWR1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 MIR6722-201ENST00000617286 78 ntBASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM59Q8IWR1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
TRIM59Q8IWR1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM59Q8IWR1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM59Q8IWR1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms