Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 Z92544.1-202ENST00000571933 1220 ntBASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 MIR6722-201ENST00000617286 78 ntBASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIST2H3AQ71DI3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.8■□□□□ 0.76
HIST2H3AQ71DI3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIST2H3AQ71DI3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HIST2H3AQ71DI3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.77■□□□□ 0.76
HIST2H3AQ71DI3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST2H3AQ71DI3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIST2H3AQ71DI3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HIST2H3AQ71DI3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 AC092028.1-203ENST00000608262 953 ntBASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIST2H3AQ71DI3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 AC068473.5-201ENST00000616428 2072 ntBASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIST2H3AQ71DI3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms