Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 TVP38YKR088C 1014 nt4.16□□□□□ -1.74
VPS13Q07878 MRPL51YPR100W 423 nt4.16□□□□□ -1.74
VPS13Q07878 MHF2YDL160C-A 243 nt4.15□□□□□ -1.75
VPS13Q07878 NAT2YGR147C 867 nt4.15□□□□□ -1.75
VPS13Q07878 GCD14YJL125C 1152 nt4.15□□□□□ -1.75
VPS13Q07878 COX19YLL018C-A 297 nt4.15□□□□□ -1.75
VPS13Q07878 PRD1YCL057W 2139 nt4.14□□□□□ -1.75
VPS13Q07878 EHD3YDR036C 1503 nt4.14□□□□□ -1.75
VPS13Q07878 GUP1YGL084C 1683 nt4.14□□□□□ -1.75
VPS13Q07878 YDR271CYDR271C 372 nt4.14□□□□□ -1.75
VPS13Q07878 RML2YEL050C 1182 nt4.14□□□□□ -1.75
VPS13Q07878 DIN7YDR263C 1293 nt4.13□□□□□ -1.75
VPS13Q07878 YGL218WYGL218W 651 nt4.13□□□□□ -1.75
VPS13Q07878 RGT1YKL038W 3513 nt4.13□□□□□ -1.75
VPS13Q07878 ADE6YGR061C 4077 nt4.13□□□□□ -1.75
VPS13Q07878 SED4YCR067C 3198 nt4.13□□□□□ -1.75
VPS13Q07878 AAD4YDL243C 990 nt4.13□□□□□ -1.75
VPS13Q07878 RRP17YDR412W 708 nt4.13□□□□□ -1.75
VPS13Q07878 YGR053CYGR053C 852 nt4.13□□□□□ -1.75
VPS13Q07878 YLR049CYLR049C 1287 nt4.13□□□□□ -1.75
VPS13Q07878 LRG1YDL240W 3054 nt4.13□□□□□ -1.75
VPS13Q07878 CTR3YLR411W 726 nt4.12□□□□□ -1.75
VPS13Q07878 HRK1YOR267C 2280 nt4.12□□□□□ -1.75
VPS13Q07878 YOR008W-BYOR008W-B 102 nt4.12□□□□□ -1.75
VPS13Q07878 PTA1YAL043C 2358 nt4.12□□□□□ -1.75
VPS13Q07878 TRP1YDR007W 675 nt4.12□□□□□ -1.75
VPS13Q07878 PPX1YHR201C 1194 nt4.12□□□□□ -1.75
VPS13Q07878 PEA2YER149C 1263 nt4.11□□□□□ -1.75
VPS13Q07878 MTC3YGL226W 372 nt4.11□□□□□ -1.75
VPS13Q07878 PAH1YMR165C 2589 nt4.11□□□□□ -1.75
VPS13Q07878 MST1YKL194C 1389 nt4.11□□□□□ -1.75
VPS13Q07878 SPC19YDR201W 498 nt4.11□□□□□ -1.75
VPS13Q07878 PAU10YDR542W 363 nt4.1□□□□□ -1.75
VPS13Q07878 PAU11YGL261C 363 nt4.1□□□□□ -1.75
VPS13Q07878 PAU13YHL046C 363 nt4.1□□□□□ -1.75
VPS13Q07878 PAU4YLR461W 363 nt4.1□□□□□ -1.75
VPS13Q07878 KRE6YPR159W 2163 nt4.1□□□□□ -1.75
VPS13Q07878 SSU1YPL092W 1377 nt4.1□□□□□ -1.75
VPS13Q07878 YKL023WYKL023W 834 nt4.1□□□□□ -1.75
VPS13Q07878 RAD27YKL113C 1149 nt4.1□□□□□ -1.75
VPS13Q07878 RPS19AYOL121C 435 nt4.1□□□□□ -1.75
VPS13Q07878 RAD52YML032C 1416 nt4.1□□□□□ -1.75
VPS13Q07878 RPL28YGL103W 450 nt4.09□□□□□ -1.75
VPS13Q07878 STE20YHL007C 2820 nt4.09□□□□□ -1.75
VPS13Q07878 TOS3YGL179C 1683 nt4.08□□□□□ -1.76
VPS13Q07878 AHP1YLR109W 531 nt4.08□□□□□ -1.76
VPS13Q07878 MGS1YNL218W 1764 nt4.08□□□□□ -1.76
VPS13Q07878 SPT15YER148W 723 nt4.08□□□□□ -1.76
VPS13Q07878 SEC72YLR292C 582 nt4.08□□□□□ -1.76
VPS13Q07878 TMA10YLR327C 261 nt4.08□□□□□ -1.76
VPS13Q07878 MDJ2YNL328C 441 nt4.08□□□□□ -1.76
VPS13Q07878 RPO26YPR187W 468 nt4.08□□□□□ -1.76
VPS13Q07878 SHG1YBR258C 429 nt4.08□□□□□ -1.76
VPS13Q07878 CDC4YFL009W 2340 nt4.07□□□□□ -1.76
VPS13Q07878 IMA3YIL172C 1770 nt4.07□□□□□ -1.76
VPS13Q07878 IMA4YJL221C 1770 nt4.07□□□□□ -1.76
VPS13Q07878 CCW14YLR390W-A 717 nt4.07□□□□□ -1.76
VPS13Q07878 VTC2YFL004W 2487 nt4.07□□□□□ -1.76
VPS13Q07878 ARG4YHR018C 1392 nt4.07□□□□□ -1.76
VPS13Q07878 MAG1YER142C 891 nt4.06□□□□□ -1.76
VPS13Q07878 FDH1YOR388C 1131 nt4.06□□□□□ -1.76
VPS13Q07878 FDH2YPL275W 711 nt4.06□□□□□ -1.76
VPS13Q07878 MRH4YGL064C 1686 nt4.06□□□□□ -1.76
VPS13Q07878 BUD17YNR027W 954 nt4.06□□□□□ -1.76
VPS13Q07878 HXK2YGL253W 1461 nt4.06□□□□□ -1.76
VPS13Q07878 YIL171WYIL171W 330 nt4.06□□□□□ -1.76
VPS13Q07878 IMD4YML056C 1575 nt4.05□□□□□ -1.76
VPS13Q07878 HUT1YPL244C 1020 nt4.05□□□□□ -1.76
VPS13Q07878 SPC105YGL093W 2754 nt4.05□□□□□ -1.76
VPS13Q07878 PTM1YKL039W 1572 nt4.05□□□□□ -1.76
VPS13Q07878 NSA2YER126C 786 nt4.05□□□□□ -1.76
VPS13Q07878 RPL24AYGL031C 468 nt4.05□□□□□ -1.76
VPS13Q07878 RDN5-1RDN5-1 121 nt4.05□□□□□ -1.76
VPS13Q07878 RDN5-6RDN5-6 121 nt4.05□□□□□ -1.76
VPS13Q07878 RIA1YNL163C 3333 nt4.05□□□□□ -1.76
VPS13Q07878 PMT6YGR199W 2280 nt4.04□□□□□ -1.76
VPS13Q07878 YCL012CYCL012C 405 nt4.04□□□□□ -1.76
VPS13Q07878 ATH1YPR026W 3636 nt4.04□□□□□ -1.76
VPS13Q07878 ELO2YCR034W 1044 nt4.04□□□□□ -1.76
VPS13Q07878 NUS1YDL193W 1128 nt4.04□□□□□ -1.76
VPS13Q07878 YKL223WYKL223W 333 nt4.04□□□□□ -1.76
VPS13Q07878 RPG1YBR079C 2895 nt4.04□□□□□ -1.76
VPS13Q07878 OCA5YHL029C 2040 nt4.04□□□□□ -1.76
VPS13Q07878 FBP1YLR377C 1047 nt4.04□□□□□ -1.76
VPS13Q07878 NSI1YDR026C 1713 nt4.03□□□□□ -1.76
VPS13Q07878 UPC2YDR213W 2742 nt4.03□□□□□ -1.76
VPS13Q07878 PAU23YLR037C 375 nt4.03□□□□□ -1.76
VPS13Q07878 YML020WYML020W 1995 nt4.03□□□□□ -1.76
VPS13Q07878 TRP3YKL211C 1455 nt4.03□□□□□ -1.76
VPS13Q07878 snR7-SsnR7-S 179 nt4.03□□□□□ -1.76
VPS13Q07878 YGL041W-AYGL041W-A 465 nt4.03□□□□□ -1.76
VPS13Q07878 IMP2YMR035W 534 nt4.03□□□□□ -1.76
VPS13Q07878 OPI6YDL096C 327 nt4.02□□□□□ -1.77
VPS13Q07878 AGE2YIL044C 897 nt4.02□□□□□ -1.77
VPS13Q07878 UBP9YER098W 2265 nt4.02□□□□□ -1.77
VPS13Q07878 PHO90YJL198W 2646 nt4.02□□□□□ -1.77
VPS13Q07878 YHR180WYHR180W 492 nt4.02□□□□□ -1.77
VPS13Q07878 GIP2YER054C 1647 nt4.02□□□□□ -1.77
VPS13Q07878 ERG7YHR072W 2196 nt4.02□□□□□ -1.77
VPS13Q07878 YGL072CYGL072C 360 nt4.01□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms