Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLNS1AP54105 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLNS1AP54105 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.3■■□□□ 1.16
CLNS1AP54105 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.3■■□□□ 1.16
CLNS1AP54105 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.3■■□□□ 1.16
CLNS1AP54105 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.3■■□□□ 1.16
CLNS1AP54105 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.3■■□□□ 1.16
CLNS1AP54105 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.3■■□□□ 1.16
CLNS1AP54105 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLNS1AP54105 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLNS1AP54105 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.29■■□□□ 1.16
CLNS1AP54105 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CLNS1AP54105 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLNS1AP54105 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLNS1AP54105 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLNS1AP54105 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.29■■□□□ 1.16
CLNS1AP54105 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CLNS1AP54105 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLNS1AP54105 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.29■■□□□ 1.16
CLNS1AP54105 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.29■■□□□ 1.16
CLNS1AP54105 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.28■■□□□ 1.16
CLNS1AP54105 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLNS1AP54105 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.28■■□□□ 1.16
CLNS1AP54105 AC026202.3-201ENST00000600805 1127 ntBASIC22.28■■□□□ 1.16
CLNS1AP54105 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.28■■□□□ 1.16
CLNS1AP54105 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLNS1AP54105 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.28■■□□□ 1.16
CLNS1AP54105 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLNS1AP54105 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CLNS1AP54105 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CLNS1AP54105 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLNS1AP54105 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLNS1AP54105 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.26■■□□□ 1.15
CLNS1AP54105 GPX1-201ENST00000419349 1106 ntBASIC22.26■■□□□ 1.15
CLNS1AP54105 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.26■■□□□ 1.15
CLNS1AP54105 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLNS1AP54105 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLNS1AP54105 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CLNS1AP54105 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.26■■□□□ 1.15
CLNS1AP54105 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.26■■□□□ 1.15
CLNS1AP54105 AC004812.2-201ENST00000611079 2094 ntBASIC22.26■■□□□ 1.15
CLNS1AP54105 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CLNS1AP54105 HLA-L-211ENST00000482052 1765 ntBASIC22.25■■□□□ 1.15
CLNS1AP54105 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLNS1AP54105 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLNS1AP54105 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLNS1AP54105 MIR4449-201ENST00000578365 66 ntBASIC22.25■■□□□ 1.15
CLNS1AP54105 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CLNS1AP54105 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CLNS1AP54105 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CLNS1AP54105 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLNS1AP54105 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLNS1AP54105 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.24■■□□□ 1.15
CLNS1AP54105 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CLNS1AP54105 AC073130.3-201ENST00000624389 2278 ntBASIC22.24■■□□□ 1.15
CLNS1AP54105 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.24■■□□□ 1.15
CLNS1AP54105 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLNS1AP54105 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLNS1AP54105 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.23■■□□□ 1.15
CLNS1AP54105 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLNS1AP54105 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.23■■□□□ 1.15
CLNS1AP54105 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CLNS1AP54105 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLNS1AP54105 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLNS1AP54105 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CLNS1AP54105 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
CLNS1AP54105 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CLNS1AP54105 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.22■■□□□ 1.15
CLNS1AP54105 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
CLNS1AP54105 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.22■■□□□ 1.15
CLNS1AP54105 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CLNS1AP54105 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.22■■□□□ 1.15
CLNS1AP54105 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLNS1AP54105 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLNS1AP54105 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms