Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 YMR221CYMR221C 1515 nt4.37□□□□□ -1.71
USE1P53146 TRF5YNL299W 1929 nt4.37□□□□□ -1.71
USE1P53146 SAP155YFR040W 3009 nt4.37□□□□□ -1.71
USE1P53146 ARO2YGL148W 1131 nt4.37□□□□□ -1.71
USE1P53146 tS(AGA)D3tS(AGA)D3 83 nt4.37□□□□□ -1.71
USE1P53146 LOH1YJL038C 660 nt4.37□□□□□ -1.71
USE1P53146 PRM10YJL108C 1152 nt4.37□□□□□ -1.71
USE1P53146 MRE11YMR224C 2079 nt4.37□□□□□ -1.71
USE1P53146 YGR266WYGR266W 2106 nt4.37□□□□□ -1.71
USE1P53146 MBP1YDL056W 2502 nt4.37□□□□□ -1.71
USE1P53146 SVF1YDR346C 1446 nt4.37□□□□□ -1.71
USE1P53146 TIF4632YGL049C 2745 nt4.37□□□□□ -1.71
USE1P53146 SCS2YER120W 735 nt4.36□□□□□ -1.71
USE1P53146 TYW3YGL050W 822 nt4.36□□□□□ -1.71
USE1P53146 TOM40YMR203W 1164 nt4.36□□□□□ -1.71
USE1P53146 GRE1YPL223C 507 nt4.36□□□□□ -1.71
USE1P53146 KCC4YCL024W 3114 nt4.36□□□□□ -1.71
USE1P53146 FAA4YMR246W 2085 nt4.36□□□□□ -1.71
USE1P53146 HPM1YIL110W 1134 nt4.35□□□□□ -1.71
USE1P53146 YNL217WYNL217W 981 nt4.35□□□□□ -1.71
USE1P53146 HEM15YOR176W 1182 nt4.35□□□□□ -1.71
USE1P53146 EMP47YFL048C 1338 nt4.35□□□□□ -1.71
USE1P53146 LPL1YOR059C 1353 nt4.35□□□□□ -1.71
USE1P53146 FAA3YIL009W 2085 nt4.34□□□□□ -1.71
USE1P53146 OCA4YCR095C 1089 nt4.34□□□□□ -1.71
USE1P53146 THI13YDL244W 1023 nt4.34□□□□□ -1.71
USE1P53146 SUR2YDR297W 1050 nt4.34□□□□□ -1.71
USE1P53146 YFL064CYFL064C 525 nt4.34□□□□□ -1.71
USE1P53146 IRC7YFR055W 1023 nt4.34□□□□□ -1.71
USE1P53146 YIL028WYIL028W 399 nt4.34□□□□□ -1.71
USE1P53146 THI11YJR156C 1023 nt4.34□□□□□ -1.71
USE1P53146 YKR104WYKR104W 921 nt4.34□□□□□ -1.71
USE1P53146 YPR202WYPR202W 717 nt4.34□□□□□ -1.71
USE1P53146 PBN1YCL052C 1251 nt4.34□□□□□ -1.71
USE1P53146 CBP1YJL209W 1965 nt4.34□□□□□ -1.71
USE1P53146 SLD2YKL108W 1362 nt4.33□□□□□ -1.72
USE1P53146 WTM1YOR230W 1314 nt4.33□□□□□ -1.72
USE1P53146 CNL1YDR357C 369 nt4.33□□□□□ -1.72
USE1P53146 PRE9YGR135W 777 nt4.33□□□□□ -1.72
USE1P53146 SOL4YGR248W 768 nt4.33□□□□□ -1.72
USE1P53146 YLR283WYLR283W 945 nt4.33□□□□□ -1.72
USE1P53146 TDA5YLR426W 981 nt4.33□□□□□ -1.72
USE1P53146 GTR1YML121W 933 nt4.33□□□□□ -1.72
USE1P53146 TOM7YNL070W 183 nt4.33□□□□□ -1.72
USE1P53146 RFA2YNL312W 822 nt4.33□□□□□ -1.72
USE1P53146 YOR292CYOR292C 930 nt4.33□□□□□ -1.72
USE1P53146 YCF1YDR135C 4548 nt4.33□□□□□ -1.72
USE1P53146 VPS73YGL104C 1461 nt4.32□□□□□ -1.72
USE1P53146 LCP5YER127W 1074 nt4.32□□□□□ -1.72
USE1P53146 DAL3YIR032C 588 nt4.32□□□□□ -1.72
USE1P53146 NTR2YKR022C 969 nt4.32□□□□□ -1.72
USE1P53146 MRPL39YML009C 213 nt4.32□□□□□ -1.72
USE1P53146 UBA3YPR066W 900 nt4.32□□□□□ -1.72
USE1P53146 FPK1YNR047W 2682 nt4.32□□□□□ -1.72
USE1P53146 ATH1YPR026W 3636 nt4.32□□□□□ -1.72
USE1P53146 SEN1YLR430W 6696 nt4.31□□□□□ -1.72
USE1P53146 NOP8YOL144W 1455 nt4.31□□□□□ -1.72
USE1P53146 MAG2YLR427W 2013 nt4.31□□□□□ -1.72
USE1P53146 MSC7YHR039C 1935 nt4.31□□□□□ -1.72
USE1P53146 RAD27YKL113C 1149 nt4.31□□□□□ -1.72
USE1P53146 PAU17YLL025W 375 nt4.31□□□□□ -1.72
USE1P53146 YPL077CYPL077C 723 nt4.31□□□□□ -1.72
USE1P53146 YDL027CYDL027C 1263 nt4.3□□□□□ -1.72
USE1P53146 SRB6YBR253W 366 nt4.3□□□□□ -1.72
USE1P53146 YIL001WYIL001W 1542 nt4.3□□□□□ -1.72
USE1P53146 IML2YJL082W 2196 nt4.3□□□□□ -1.72
USE1P53146 YPK9YOR291W 4419 nt4.3□□□□□ -1.72
USE1P53146 CDS1YBR029C 1374 nt4.29□□□□□ -1.72
USE1P53146 DAM1YGR113W 1032 nt4.29□□□□□ -1.72
USE1P53146 COS6YGR295C 1146 nt4.29□□□□□ -1.72
USE1P53146 ERG3YLR056W 1098 nt4.29□□□□□ -1.72
USE1P53146 SEC72YLR292C 582 nt4.29□□□□□ -1.72
USE1P53146 FEX1YOR390W 1128 nt4.29□□□□□ -1.72
USE1P53146 FEX2YPL279C 1128 nt4.29□□□□□ -1.72
USE1P53146 PIM1YBL022C 3402 nt4.29□□□□□ -1.72
USE1P53146 TFG1YGR186W 2208 nt4.29□□□□□ -1.72
USE1P53146 GAL11YOL051W 3246 nt4.29□□□□□ -1.72
USE1P53146 SUM1YDR310C 3189 nt4.28□□□□□ -1.72
USE1P53146 ALG2YGL065C 1512 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)CtQ(UUG)C 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)D1tQ(UUG)D1 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)D2tQ(UUG)D2 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)D3tQ(UUG)D3 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)E1tQ(UUG)E1 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)HtQ(UUG)H 72 nt4.28□□□□□ -1.72
USE1P53146 tQ(UUG)LtQ(UUG)L 72 nt4.28□□□□□ -1.72
USE1P53146 OSW5YMR148W 447 nt4.28□□□□□ -1.72
USE1P53146 ROT1YMR200W 771 nt4.28□□□□□ -1.72
USE1P53146 RPC19YNL113W 429 nt4.28□□□□□ -1.72
USE1P53146 RMI1YPL024W 726 nt4.28□□□□□ -1.72
USE1P53146 SSH1YBR283C 1473 nt4.28□□□□□ -1.72
USE1P53146 BUD8YLR353W 1812 nt4.28□□□□□ -1.72
USE1P53146 CLB4YLR210W 1383 nt4.27□□□□□ -1.73
USE1P53146 RFT1YBL020W 1725 nt4.27□□□□□ -1.73
USE1P53146 TRM8YDL201W 861 nt4.27□□□□□ -1.73
USE1P53146 ARP10YDR106W 855 nt4.27□□□□□ -1.73
USE1P53146 YEL009C-AYEL009C-A 408 nt4.27□□□□□ -1.73
USE1P53146 YER145C-AYER145C-A 438 nt4.27□□□□□ -1.73
USE1P53146 YIL165CYIL165C 360 nt4.27□□□□□ -1.73
USE1P53146 YKL169CYKL169C 384 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms