Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.92■■□□□ 1.1
PDX1P52945 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.91■■□□□ 1.1
PDX1P52945 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 AL022069.1-201ENST00000568025 1636 ntBASIC21.91■■□□□ 1.1
PDX1P52945 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PDX1P52945 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.91■■□□□ 1.1
PDX1P52945 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.91■■□□□ 1.1
PDX1P52945 AC087623.3-201ENST00000607047 1098 ntBASIC21.91■■□□□ 1.1
PDX1P52945 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDX1P52945 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PDX1P52945 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.9■■□□□ 1.1
PDX1P52945 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PDX1P52945 AP003733.4-201ENST00000623785 1697 ntBASIC21.9■■□□□ 1.1
PDX1P52945 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.9■■□□□ 1.1
PDX1P52945 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDX1P52945 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.89■■□□□ 1.1
PDX1P52945 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDX1P52945 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDX1P52945 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDX1P52945 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.89■■□□□ 1.09
PDX1P52945 AC006455.2-201ENST00000429931 906 ntBASIC21.89■■□□□ 1.09
PDX1P52945 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.89■■□□□ 1.09
PDX1P52945 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDX1P52945 AC008764.7-201ENST00000593779 1081 ntBASIC21.89■■□□□ 1.09
PDX1P52945 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
PDX1P52945 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.89■■□□□ 1.09
PDX1P52945 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.89■■□□□ 1.09
PDX1P52945 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDX1P52945 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.88■■□□□ 1.09
PDX1P52945 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDX1P52945 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDX1P52945 AC099791.1-201ENST00000416440 715 ntBASIC21.88■■□□□ 1.09
PDX1P52945 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.88■■□□□ 1.09
PDX1P52945 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.88■■□□□ 1.09
PDX1P52945 AC136469.2-201ENST00000623944 1028 ntBASIC21.88■■□□□ 1.09
PDX1P52945 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.88■■□□□ 1.09
PDX1P52945 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.88■■□□□ 1.09
PDX1P52945 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDX1P52945 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.88■■□□□ 1.09
PDX1P52945 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDX1P52945 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDX1P52945 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDX1P52945 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDX1P52945 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.87■■□□□ 1.09
PDX1P52945 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.87■■□□□ 1.09
PDX1P52945 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDX1P52945 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PDX1P52945 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDX1P52945 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDX1P52945 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PDX1P52945 AL162430.1-201ENST00000480705 870 ntBASIC21.86■■□□□ 1.09
PDX1P52945 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDX1P52945 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.86■■□□□ 1.09
PDX1P52945 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDX1P52945 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDX1P52945 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.85■■□□□ 1.09
PDX1P52945 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.85■■□□□ 1.09
PDX1P52945 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.85■■□□□ 1.09
PDX1P52945 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDX1P52945 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.84■■□□□ 1.09
PDX1P52945 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.84■■□□□ 1.09
PDX1P52945 AC241377.3-202ENST00000626088 1088 ntBASIC21.84■■□□□ 1.09
PDX1P52945 AC241585.3-202ENST00000628937 1088 ntBASIC21.84■■□□□ 1.09
PDX1P52945 AC245100.8-202ENST00000629247 1058 ntBASIC21.84■■□□□ 1.09
PDX1P52945 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
PDX1P52945 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDX1P52945 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.83■■□□□ 1.09
PDX1P52945 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDX1P52945 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.83■■□□□ 1.09
PDX1P52945 IRS3P-201ENST00000223076 1006 ntBASIC21.83■■□□□ 1.09
PDX1P52945 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.83■■□□□ 1.09
PDX1P52945 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms