Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YMR135W-AYMR135W-A 534 nt6.08□□□□□ -1.44
VPS53P47061 SCO1YBR037C 888 nt6.08□□□□□ -1.44
VPS53P47061 BBP1YPL255W 1158 nt6.08□□□□□ -1.44
VPS53P47061 YPR142CYPR142C 564 nt6.08□□□□□ -1.44
VPS53P47061 YBR134WYBR134W 402 nt6.08□□□□□ -1.44
VPS53P47061 STE50YCL032W 1041 nt6.08□□□□□ -1.44
VPS53P47061 PHO12YHR215W 1404 nt6.08□□□□□ -1.44
VPS53P47061 PHO11YAR071W 1404 nt6.08□□□□□ -1.44
VPS53P47061 TBF1YPL128C 1689 nt6.07□□□□□ -1.44
VPS53P47061 YLH47YPR125W 1365 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)CtN(GUU)C 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)FtN(GUU)F 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)GtN(GUU)G 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)KtN(GUU)K 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)LtN(GUU)L 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)N1tN(GUU)N1 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)N2tN(GUU)N2 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)O1tN(GUU)O1 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)O2tN(GUU)O2 74 nt6.07□□□□□ -1.44
VPS53P47061 tN(GUU)PtN(GUU)P 74 nt6.07□□□□□ -1.44
VPS53P47061 ATP14YLR295C 375 nt6.07□□□□□ -1.44
VPS53P47061 YLR363W-AYLR363W-A 258 nt6.07□□□□□ -1.44
VPS53P47061 ROT1YMR200W 771 nt6.07□□□□□ -1.44
VPS53P47061 YNL019CYNL019C 855 nt6.07□□□□□ -1.44
VPS53P47061 YNL033WYNL033W 855 nt6.07□□□□□ -1.44
VPS53P47061 ATG14YBR128C 1035 nt6.07□□□□□ -1.44
VPS53P47061 TRP3YKL211C 1455 nt6.07□□□□□ -1.44
VPS53P47061 BUL1YMR275C 2931 nt6.07□□□□□ -1.44
VPS53P47061 QRI1YDL103C 1434 nt6.07□□□□□ -1.44
VPS53P47061 YDL034WYDL034W 345 nt6.06□□□□□ -1.44
VPS53P47061 DOS2YDR068W 933 nt6.06□□□□□ -1.44
VPS53P47061 NBP2YDR162C 711 nt6.06□□□□□ -1.44
VPS53P47061 PLP1YDR183W 693 nt6.06□□□□□ -1.44
VPS53P47061 ERJ5YFR041C 888 nt6.06□□□□□ -1.44
VPS53P47061 YGR219WYGR219W 342 nt6.06□□□□□ -1.44
VPS53P47061 APN1YKL114C 1104 nt6.06□□□□□ -1.44
VPS53P47061 COS9YKL219W 1224 nt6.06□□□□□ -1.44
VPS53P47061 POR1YNL055C 852 nt6.06□□□□□ -1.44
VPS53P47061 YNL296WYNL296W 315 nt6.06□□□□□ -1.44
VPS53P47061 RFM1YOR279C 933 nt6.06□□□□□ -1.44
VPS53P47061 SPO19YPL130W 672 nt6.06□□□□□ -1.44
VPS53P47061 LCB2YDR062W 1686 nt6.06□□□□□ -1.44
VPS53P47061 SNZ3YFL059W 897 nt6.05□□□□□ -1.44
VPS53P47061 COS4YFL062W 1140 nt6.05□□□□□ -1.44
VPS53P47061 SCEIQ0160 708 nt6.05□□□□□ -1.44
VPS53P47061 YHR214WYHR214W 612 nt6.05□□□□□ -1.44
VPS53P47061 YLR042CYLR042C 486 nt6.05□□□□□ -1.44
VPS53P47061 YAR066WYAR066W 612 nt6.05□□□□□ -1.44
VPS53P47061 YLR296WYLR296W 327 nt6.05□□□□□ -1.44
VPS53P47061 YLR374CYLR374C 390 nt6.05□□□□□ -1.44
VPS53P47061 PGA3YML125C 939 nt6.05□□□□□ -1.44
VPS53P47061 COS3YML132W 1140 nt6.05□□□□□ -1.44
VPS53P47061 YNL171CYNL171C 369 nt6.05□□□□□ -1.44
VPS53P47061 YBL077WYBL077W 432 nt6.05□□□□□ -1.44
VPS53P47061 SNZ2YNL333W 897 nt6.05□□□□□ -1.44
VPS53P47061 MDM12YOL009C 816 nt6.05□□□□□ -1.44
VPS53P47061 YBR013CYBR013C 390 nt6.05□□□□□ -1.44
VPS53P47061 RPB8YOR224C 441 nt6.05□□□□□ -1.44
VPS53P47061 NRG2YBR066C 663 nt6.05□□□□□ -1.44
VPS53P47061 MRPL37YBR268W 318 nt6.05□□□□□ -1.44
VPS53P47061 COS2YBR302C 1140 nt6.05□□□□□ -1.44
VPS53P47061 HXT3YDR345C 1704 nt6.05□□□□□ -1.44
VPS53P47061 STE12YHR084W 2067 nt6.04□□□□□ -1.44
VPS53P47061 YCR024C-BYCR024C-B 267 nt6.04□□□□□ -1.44
VPS53P47061 YCR075W-AYCR075W-A 228 nt6.04□□□□□ -1.44
VPS53P47061 TTI2YJR136C 1266 nt6.04□□□□□ -1.44
VPS53P47061 PER33YLR064W 822 nt6.04□□□□□ -1.44
VPS53P47061 SEC72YLR292C 582 nt6.04□□□□□ -1.44
VPS53P47061 GAB1YLR459W 1185 nt6.04□□□□□ -1.44
VPS53P47061 ARO4YBR249C 1113 nt6.04□□□□□ -1.44
VPS53P47061 IML2YJL082W 2196 nt6.04□□□□□ -1.44
VPS53P47061 STB3YDR169C 1542 nt6.04□□□□□ -1.44
VPS53P47061 SMF2YHR050W 1650 nt6.04□□□□□ -1.44
VPS53P47061 ALT1YLR089C 1779 nt6.03□□□□□ -1.44
VPS53P47061 GSH2YOL049W 1476 nt6.03□□□□□ -1.44
VPS53P47061 YDL124WYDL124W 939 nt6.03□□□□□ -1.44
VPS53P47061 YDL183CYDL183C 963 nt6.03□□□□□ -1.44
VPS53P47061 RPN9YDR427W 1182 nt6.03□□□□□ -1.44
VPS53P47061 YFR034W-AYFR034W-A 288 nt6.03□□□□□ -1.44
VPS53P47061 BTN2YGR142W 1233 nt6.03□□□□□ -1.44
VPS53P47061 GRE3YHR104W 984 nt6.03□□□□□ -1.44
VPS53P47061 YKR051WYKR051W 1257 nt6.03□□□□□ -1.44
VPS53P47061 YLR163W-AYLR163W-A 114 nt6.03□□□□□ -1.44
VPS53P47061 GPN3YLR243W 819 nt6.03□□□□□ -1.44
VPS53P47061 CDC73YLR418C 1182 nt6.03□□□□□ -1.44
VPS53P47061 POP8YBL018C 402 nt6.03□□□□□ -1.44
VPS53P47061 SEC17YBL050W 879 nt6.03□□□□□ -1.44
VPS53P47061 MPD1YOR288C 957 nt6.03□□□□□ -1.44
VPS53P47061 RBD2YPL246C 789 nt6.03□□□□□ -1.44
VPS53P47061 YPR177CYPR177C 372 nt6.03□□□□□ -1.44
VPS53P47061 RET1YOR207C 3450 nt6.03□□□□□ -1.44
VPS53P47061 RNY1YPL123C 1305 nt6.02□□□□□ -1.45
VPS53P47061 SET5YHR207C 1581 nt6.02□□□□□ -1.45
VPS53P47061 MSS2YDL107W 1056 nt6.02□□□□□ -1.45
VPS53P47061 YGL230CYGL230C 444 nt6.02□□□□□ -1.45
VPS53P47061 ARP1YHR129C 1155 nt6.02□□□□□ -1.45
VPS53P47061 YIL152WYIL152W 708 nt6.02□□□□□ -1.45
VPS53P47061 PSF2YJL072C 642 nt6.02□□□□□ -1.45
VPS53P47061 POM33YLL023C 840 nt6.02□□□□□ -1.45
VPS53P47061 YNL108CYNL108C 813 nt6.02□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms