Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GDNFP39905 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.6■□□□□ 0.73
GDNFP39905 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GDNFP39905 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 KRT18P60-201ENST00000312876 1297 ntBASIC19.59■□□□□ 0.73
GDNFP39905 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.59■□□□□ 0.73
GDNFP39905 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GDNFP39905 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.59■□□□□ 0.73
GDNFP39905 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.59■□□□□ 0.73
GDNFP39905 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GDNFP39905 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GDNFP39905 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
GDNFP39905 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GDNFP39905 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GDNFP39905 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GDNFP39905 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GDNFP39905 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GDNFP39905 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.58■□□□□ 0.72
GDNFP39905 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
GDNFP39905 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
GDNFP39905 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
GDNFP39905 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GDNFP39905 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.58■□□□□ 0.72
GDNFP39905 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GDNFP39905 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GDNFP39905 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
GDNFP39905 DUX4L9-201ENST00000449051 1259 ntBASIC19.57■□□□□ 0.72
GDNFP39905 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.57■□□□□ 0.72
GDNFP39905 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GDNFP39905 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GDNFP39905 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GDNFP39905 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GDNFP39905 AC129492.7-201ENST00000622992 756 ntBASIC19.56■□□□□ 0.72
GDNFP39905 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GDNFP39905 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.56■□□□□ 0.72
GDNFP39905 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.56■□□□□ 0.72
GDNFP39905 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
GDNFP39905 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDNFP39905 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDNFP39905 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDNFP39905 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GDNFP39905 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GDNFP39905 NTF6A-201ENST00000591175 560 ntBASIC19.55■□□□□ 0.72
GDNFP39905 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.55■□□□□ 0.72
GDNFP39905 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.55■□□□□ 0.72
GDNFP39905 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDNFP39905 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GDNFP39905 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
GDNFP39905 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GDNFP39905 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDNFP39905 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.54■□□□□ 0.72
GDNFP39905 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDNFP39905 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.53■□□□□ 0.72
GDNFP39905 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDNFP39905 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDNFP39905 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDNFP39905 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GDNFP39905 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
GDNFP39905 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDNFP39905 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GDNFP39905 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.52■□□□□ 0.72
GDNFP39905 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.52■□□□□ 0.72
GDNFP39905 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.52■□□□□ 0.72
GDNFP39905 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.52■□□□□ 0.72
GDNFP39905 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDNFP39905 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GDNFP39905 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GDNFP39905 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
GDNFP39905 AL137060.1-201ENST00000618151 2648 ntBASIC19.52■□□□□ 0.71
GDNFP39905 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.52■□□□□ 0.71
GDNFP39905 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
GDNFP39905 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GDNFP39905 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GDNFP39905 AC018755.3-202ENST00000596210 929 ntBASIC19.51■□□□□ 0.71
GDNFP39905 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
GDNFP39905 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.51■□□□□ 0.71
GDNFP39905 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDNFP39905 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms