Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VCANP13611 LINC01003-201ENST00000564834 1764 ntBASIC23.75■■□□□ 1.39
VCANP13611 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.75■■□□□ 1.39
VCANP13611 IGHV3-19-201ENST00000521488 291 ntBASIC23.75■■□□□ 1.39
VCANP13611 SLC7A5P2-201ENST00000553010 536 ntBASIC23.75■■□□□ 1.39
VCANP13611 AC098934.4-201ENST00000564127 592 ntBASIC23.75■■□□□ 1.39
VCANP13611 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
VCANP13611 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
VCANP13611 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VCANP13611 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
VCANP13611 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.74■■□□□ 1.39
VCANP13611 MIR1224-201ENST00000408193 85 ntBASIC23.74■■□□□ 1.39
VCANP13611 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.74■■□□□ 1.39
VCANP13611 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
VCANP13611 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
VCANP13611 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.73■■□□□ 1.39
VCANP13611 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.73■■□□□ 1.39
VCANP13611 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.73■■□□□ 1.39
VCANP13611 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.73■■□□□ 1.39
VCANP13611 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.72■■□□□ 1.39
VCANP13611 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VCANP13611 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.72■■□□□ 1.39
VCANP13611 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VCANP13611 AC073210.2-201ENST00000430369 194 ntBASIC23.72■■□□□ 1.39
VCANP13611 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.72■■□□□ 1.39
VCANP13611 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VCANP13611 POU5F1P3-201ENST00000428824 1078 ntBASIC23.71■■□□□ 1.39
VCANP13611 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
VCANP13611 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.71■■□□□ 1.39
VCANP13611 LINC02228-203ENST00000641970 1355 ntBASIC23.71■■□□□ 1.39
VCANP13611 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
VCANP13611 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VCANP13611 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.71■■□□□ 1.39
VCANP13611 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VCANP13611 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VCANP13611 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
VCANP13611 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.71■■□□□ 1.39
VCANP13611 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
VCANP13611 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VCANP13611 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VCANP13611 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.7■■□□□ 1.38
VCANP13611 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.7■■□□□ 1.38
VCANP13611 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VCANP13611 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VCANP13611 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.7■■□□□ 1.38
VCANP13611 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VCANP13611 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.7■■□□□ 1.38
VCANP13611 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.7■■□□□ 1.38
VCANP13611 AC004854.2-201ENST00000608450 1441 ntBASIC23.7■■□□□ 1.38
VCANP13611 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VCANP13611 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VCANP13611 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
VCANP13611 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.69■■□□□ 1.38
VCANP13611 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.69■■□□□ 1.38
VCANP13611 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
VCANP13611 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VCANP13611 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
VCANP13611 GCSHP5-201ENST00000443090 522 ntBASIC23.69■■□□□ 1.38
VCANP13611 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.69■■□□□ 1.38
VCANP13611 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.69■■□□□ 1.38
VCANP13611 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VCANP13611 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.68■■□□□ 1.38
VCANP13611 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.68■■□□□ 1.38
VCANP13611 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.68■■□□□ 1.38
VCANP13611 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.68■■□□□ 1.38
VCANP13611 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.68■■□□□ 1.38
VCANP13611 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.68■■□□□ 1.38
VCANP13611 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.68■■□□□ 1.38
VCANP13611 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.68■■□□□ 1.38
VCANP13611 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VCANP13611 AC010331.1-201ENST00000611423 582 ntBASIC23.68■■□□□ 1.38
VCANP13611 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VCANP13611 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.67■■□□□ 1.38
VCANP13611 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.67■■□□□ 1.38
VCANP13611 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
VCANP13611 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VCANP13611 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VCANP13611 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VCANP13611 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.67■■□□□ 1.38
VCANP13611 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VCANP13611 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VCANP13611 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.66■■□□□ 1.38
VCANP13611 AC011767.1-201ENST00000617410 1153 ntBASIC23.66■■□□□ 1.38
VCANP13611 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VCANP13611 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VCANP13611 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VCANP13611 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.66■■□□□ 1.38
VCANP13611 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.66■■□□□ 1.38
VCANP13611 KRT18P29-201ENST00000397031 1267 ntBASIC23.66■■□□□ 1.38
VCANP13611 DUSP5P2-201ENST00000426873 1033 ntBASIC23.66■■□□□ 1.38
VCANP13611 ECEL1P3-201ENST00000427961 737 ntBASIC23.66■■□□□ 1.38
VCANP13611 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
VCANP13611 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
VCANP13611 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.65■■□□□ 1.38
VCANP13611 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms