Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CYP3A4P08684 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CYP3A4P08684 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP3A4P08684 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CYP3A4P08684 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.57■■□□□ 1.68
CYP3A4P08684 AC241377.3-202ENST00000626088 1088 ntBASIC25.57■■□□□ 1.68
CYP3A4P08684 AC241585.3-202ENST00000628937 1088 ntBASIC25.57■■□□□ 1.68
CYP3A4P08684 AC245100.8-202ENST00000629247 1058 ntBASIC25.57■■□□□ 1.68
CYP3A4P08684 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP3A4P08684 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP3A4P08684 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CYP3A4P08684 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP3A4P08684 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.56■■□□□ 1.68
CYP3A4P08684 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP3A4P08684 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP3A4P08684 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.56■■□□□ 1.68
CYP3A4P08684 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.56■■□□□ 1.68
CYP3A4P08684 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.56■■□□□ 1.68
CYP3A4P08684 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.56■■□□□ 1.68
CYP3A4P08684 AC099791.2-201ENST00000605725 427 ntBASIC25.56■■□□□ 1.68
CYP3A4P08684 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
CYP3A4P08684 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CYP3A4P08684 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.56■■□□□ 1.68
CYP3A4P08684 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP3A4P08684 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP3A4P08684 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CYP3A4P08684 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP3A4P08684 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CYP3A4P08684 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CYP3A4P08684 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
CYP3A4P08684 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.55■■□□□ 1.68
CYP3A4P08684 AC092171.4-201ENST00000609130 632 ntBASIC25.55■■□□□ 1.68
CYP3A4P08684 AC110285.6-201ENST00000617652 491 ntBASIC25.55■■□□□ 1.68
CYP3A4P08684 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP3A4P08684 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CYP3A4P08684 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CYP3A4P08684 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 AC093323.1-202ENST00000635031 2045 ntBASIC25.54■■□□□ 1.68
CYP3A4P08684 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 AC096631.2-201ENST00000436136 790 ntBASIC25.54■■□□□ 1.68
CYP3A4P08684 DUX4L19-201ENST00000557448 1267 ntBASIC25.54■■□□□ 1.68
CYP3A4P08684 AL139246.5-201ENST00000606645 996 ntBASIC25.54■■□□□ 1.68
CYP3A4P08684 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.54■■□□□ 1.68
CYP3A4P08684 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CYP3A4P08684 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP3A4P08684 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.53■■□□□ 1.68
CYP3A4P08684 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP3A4P08684 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CYP3A4P08684 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CYP3A4P08684 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CYP3A4P08684 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.53■■□□□ 1.68
CYP3A4P08684 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CYP3A4P08684 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 FP325331.1-202ENST00000623531 1380 ntBASIC25.52■■□□□ 1.68
CYP3A4P08684 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
CYP3A4P08684 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CYP3A4P08684 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 UNC93B3-201ENST00000308076 687 ntBASIC25.51■■□□□ 1.67
CYP3A4P08684 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP3A4P08684 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CYP3A4P08684 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
CYP3A4P08684 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.51■■□□□ 1.67
CYP3A4P08684 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP3A4P08684 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP3A4P08684 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP3A4P08684 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP3A4P08684 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.5■■□□□ 1.67
CYP3A4P08684 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.5■■□□□ 1.67
CYP3A4P08684 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.5■■□□□ 1.67
CYP3A4P08684 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CYP3A4P08684 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CYP3A4P08684 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.49■■□□□ 1.67
CYP3A4P08684 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CYP3A4P08684 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.49■■□□□ 1.67
CYP3A4P08684 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.49■■□□□ 1.67
CYP3A4P08684 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.49■■□□□ 1.67
CYP3A4P08684 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CYP3A4P08684 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 AC144652.1-201ENST00000609974 1624 ntBASIC25.48■■□□□ 1.67
CYP3A4P08684 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 AC006455.2-201ENST00000429931 906 ntBASIC25.48■■□□□ 1.67
CYP3A4P08684 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.48■■□□□ 1.67
CYP3A4P08684 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CYP3A4P08684 SYT6-210ENST00000641643 1587 ntBASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms