Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAF1P04049 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAF1P04049 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.34■□□□□ 0.85
RAF1P04049 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAF1P04049 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAF1P04049 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAF1P04049 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.33■□□□□ 0.85
RAF1P04049 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RAF1P04049 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.33■□□□□ 0.84
RAF1P04049 HLA-L-211ENST00000482052 1765 ntBASIC20.33■□□□□ 0.84
RAF1P04049 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RAF1P04049 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAF1P04049 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
RAF1P04049 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAF1P04049 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAF1P04049 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAF1P04049 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.32■□□□□ 0.84
RAF1P04049 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAF1P04049 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAF1P04049 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RAF1P04049 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.32■□□□□ 0.84
RAF1P04049 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
RAF1P04049 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAF1P04049 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.31■□□□□ 0.84
RAF1P04049 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAF1P04049 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.31■□□□□ 0.84
RAF1P04049 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.31■□□□□ 0.84
RAF1P04049 AC133561.4-201ENST00000566112 224 ntBASIC20.31■□□□□ 0.84
RAF1P04049 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.31■□□□□ 0.84
RAF1P04049 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.31■□□□□ 0.84
RAF1P04049 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.31■□□□□ 0.84
RAF1P04049 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAF1P04049 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAF1P04049 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAF1P04049 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAF1P04049 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.3■□□□□ 0.84
RAF1P04049 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.3■□□□□ 0.84
RAF1P04049 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.3■□□□□ 0.84
RAF1P04049 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.3■□□□□ 0.84
RAF1P04049 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAF1P04049 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.3■□□□□ 0.84
RAF1P04049 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.3■□□□□ 0.84
RAF1P04049 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
RAF1P04049 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAF1P04049 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.29■□□□□ 0.84
RAF1P04049 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.29■□□□□ 0.84
RAF1P04049 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.29■□□□□ 0.84
RAF1P04049 AC011551.1-201ENST00000614101 683 ntBASIC20.29■□□□□ 0.84
RAF1P04049 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAF1P04049 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAF1P04049 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAF1P04049 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.28■□□□□ 0.84
RAF1P04049 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RAF1P04049 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAF1P04049 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.28■□□□□ 0.84
RAF1P04049 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
RAF1P04049 MIR4466-201ENST00000606121 54 ntBASIC20.28■□□□□ 0.84
RAF1P04049 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAF1P04049 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RAF1P04049 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.28■□□□□ 0.84
RAF1P04049 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAF1P04049 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAF1P04049 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAF1P04049 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAF1P04049 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAF1P04049 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAF1P04049 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.27■□□□□ 0.84
RAF1P04049 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAF1P04049 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.27■□□□□ 0.84
RAF1P04049 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAF1P04049 AL024507.2-201ENST00000606070 2574 ntBASIC20.27■□□□□ 0.83
RAF1P04049 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAF1P04049 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RAF1P04049 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAF1P04049 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.26■□□□□ 0.83
RAF1P04049 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAF1P04049 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAF1P04049 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAF1P04049 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms